Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01541 ATGTCCACCACCACCTACACCATGACAAGTGACGATTCTGGGTCTGGCAATTCTGGGTCTGAAGGAATTGTAATTGCTGTTGTCATAGTTGTCATTCTTGTGAAGATAGGTCTTTTGATTTGGTTAGTGCCCAAATGCATGAAAAGATTTCAGGTTATTCGTTATTCTGGATCGTCGATTAAACAAGCACCAGACAAACAATTTATGACACTCTCTATGGATAAGTTTCTGAATGACATGGAGAGGGAGAAGCCAATCAGGTTCACTGATCAGCAGCTAAGGATTGCAACTGATAACTACTCTTTTCTCTTGGGGTCAGGAGGTTTTGGAGCTGTTTACAAAGGAAGCTTTAGCAATGGAACCATCGTAGCTGTGAAAGTTCTACGTGGGAGTTCTGACAAGAGAATTGATGAGCAGTTTATGGCAGAGGTGGGTACCATTGGTAAAGTCCACCATTTCAATCTAGTTCGTCTGTACGGGTTTTGCTTTGAAAGACACTTGAGAGCACTGGTTTACGAGTACATGGCGAATGGCGCGCTTGAGAAGTACCTGTTTCATGAAAGCACGATCTTATCGTTTGAAAAGCTTCATGAGATTGCAGTTGGCACGGCAAGAGGCATTGCTTACTTGCATGAAGAGTGCCAACAGAGAATAATCCACTACGACATTAAACCGGGAAATATTCTCTTGGACCGGAACTTCTGTCCTAAAGTTGCTGATTTTGGTTTGGCCAAGCTTTGCAACAGGGACAATACTCATATAAGCATGACTGGAGGCAGAGGGACTCCTGGTTATGCTGCACCTGAACTTTGGTTGCCATTTCCTGTAACTCACAAGTGTGATGTTTACAGCTTTGGCATGCTGTTGTTTGAAATCATTGGCAGGAGAAGAAACCATAACATTAACCTTCCAGAAAGTCAGGTGTGGTTTCCAATGTGGGTTTGGGAAAGATTTGATGCTGAAAAAGTTGGGGATTTGATAACTGCCTGTGAGATAGAGGATCAAAATAGGGAGATTGCAGAAAGAATTGTTAAGGTAGCTCTGTCATGTGTTCAGTATAGGCCAGAAGCACGACCTATAATGAGTGTTGTGGTGAAAATGTTGGAAGGTTCTGTTGAAGTTCCAAAAGCTCTGAACCCATTTCAACACCTAATTGATTGGACTCCTCTTCCCATCGATTCGGTCCAAGCATCGCAGACCGATACTGATACAAGTATTTATTCTGACTCTTCAGTGTTGGTAACCAAATCTGTCCAAGTACTTGCCACACCTGTTATGACCAAGTACGAGATTGAATTAGCTTCTGCCTAA 1311 0.4272 MSTTTYTMTSDDSGSGNSGSEGIVIAVVIVVILVKIGLLIWLVPKCMKRFQVIRYSGSSIKQAPDKQFMTLSMDKFLNDMEREKPIRFTDQQLRIATDNYSFLLGSGGFGAVYKGSFSNGTIVAVKVLRGSSDKRIDEQFMAEVGTIGKVHHFNLVRLYGFCFERHLRALVYEYMANGALEKYLFHESTILSFEKLHEIAVGTARGIAYLHEECQQRIIHYDIKPGNILLDRNFCPKVADFGLAKLCNRDNTHISMTGGRGTPGYAAPELWLPFPVTHKCDVYSFGMLLFEIIGRRRNHNINLPESQVWFPMWVWERFDAEKVGDLITACEIEDQNREIAERIVKVALSCVQYRPEARPIMSVVVKMLEGSVEVPKALNPFQHLIDWTPLPIDSVQASQTDTDTSIYSDSSVLVTKSVQVLATPVMTKYEIELASA 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01541 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Pumo2g01541 436 FunFam Putative receptor-like protein kinase 175 376 - -
Pumo2g01541 436 ProSiteProfiles Protein kinase domain profile. 98 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g01541 436 SMART serkin_6 100 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g01541 436 ProSitePatterns Protein kinases ATP-binding region signature. 104 126 IPR017441 GO:0005524
Pumo2g01541 436 Gene3D Transferase(Phosphotransferase) domain 1 175 379 - -
Pumo2g01541 436 Gene3D Phosphorylase Kinase; domain 1 72 174 - -
Pumo2g01541 436 PANTHER OS07G0415500 PROTEIN 15 380 - -
Pumo2g01541 436 FunFam serine/threonine-protein kinase PBS1-like 68 174 - -
Pumo2g01541 436 Pfam Protein tyrosine and serine/threonine kinase 104 368 IPR001245 GO:0004672|GO:0006468
Pumo2g01541 436 SUPERFAMILY Protein kinase-like (PK-like) 81 369 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01541 Pumo-Chr2 28596833 28598532 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01541 87 374 Receptor kinase-like Gene Family AT5G38280 43.144 3.57e-78 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Pumo2g01541 PK_Tyr_Ser-Thr 8.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01541 - - gmx:100305451 696.812