Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01536 ATGAATGTACTTCAGATAAGTTATGATGGACTAACATCTATGGAAAAAGATATATTTTTACACATTGCGTGTTTCTTTAAATGGGAGAGGGAGGATTATGTTAAGCGAGTTCTAGAATGTTGGGGATTACACCCTCATATTGGATTCCCAGTGATCATTGAGAAAGCCTTGATAACTATTAGAGATCAAGAAATTTATATGCATGATATGTTTCAAGAATTGGGAAGGAAAATTGTTAGTGACAAATTTCCTACTGAGCCAGGATCATGGAGTAGATTATGGTGTTATGAAGATTTCTATCACGTCTTAATGGCTGAAATGGTAACGAACTATATCTTCAAAATTAGTGAGTGTTGA 357 0.3417 MNVLQISYDGLTSMEKDIFLHIACFFKWEREDYVKRVLECWGLHPHIGFPVIIEKALITIRDQEIYMHDMFQELGRKIVSDKFPTEPGSWSRLWCYEDFYHVLMAEMVTNYIFKISEC 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01536 118 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 103 IPR044974 GO:0006952
Pumo2g01536 118 SUPERFAMILY "Winged helix" DNA-binding domain 2 103 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01536 Pumo-Chr2 28252438 28253182 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01536 1 94 WRKY Transcription Factor Family AT5G45050 42.553 1.75e-22 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01536 - - ccaj:109817829 187.193