Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01485 ATGCACTACGAACTAACGAGCGTTTTCAATGCTCCACGGGGCCATGGTCCTCATGGATCATCTCCAGTTTCGACAGAGTTATCTCTAACTTTTTCAAGCAGCAAAAAGAAGAATCAGAGTGGTGCAACCCATGACCACCCCAGGGAGAGAAATCAAAAGAAAACCAAAGAGAAGCAGCAGTTCTGGGGGTGTTCGACTTCGCTGGAGCTCTACAACAACCCTTGGAAGATCAAGAAAGTGTTGATGAAGAGCGATGTCGGGAGACTGAGCAGGCTCTTGTTCCGGTCCGATTTGCTGGAGAATTTAATGCTTCCTGTTCTGGATGCTGAGGCTCGGAGAGACGCCGAGAGTGGAATGGGAACCCCGGTTAATGTTTGGGATGTTGACACCATGTCCATGCACAGGCTCGTCCTCAAGCGCTGGGCCTCTTTCAAGAACTTTGTTCTTGTTGGTGGCTGGAACCGTGACTTTGTCAGGAGAAGGGGCTTGAAGAAAGGAGATGAAGTTGGGTTTCTTTGGGATTCTTATGCTCACTGCTTTCACTTCAAGGTGCTTAAACCAGTTGATGACTAG 573 0.4869 MHYELTSVFNAPRGHGPHGSSPVSTELSLTFSSSKKKNQSGATHDHPRERNQKKTKEKQQFWGCSTSLELYNNPWKIKKVLMKSDVGRLSRLLFRSDLLENLMLPVLDAEARRDAESGMGTPVNVWDVDTMSMHRLVLKRWASFKNFVLVGGWNRDFVRRRGLKKGDEVGFLWDSYAHCFHFKVLKPVDD 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01485 190 Gene3D - 71 185 IPR015300 -
Pumo2g01485 190 MobiDBLite consensus disorder prediction 1 59 - -
Pumo2g01485 190 SUPERFAMILY DNA-binding pseudobarrel domain 74 185 IPR015300 -
Pumo2g01485 190 MobiDBLite consensus disorder prediction 39 57 - -
Pumo2g01485 190 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 43 186 - -
Pumo2g01485 190 CDD B3_DNA 75 186 IPR003340 GO:0003677
Pumo2g01485 190 MobiDBLite consensus disorder prediction 21 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01485 Pumo-Chr2 22145729 22146301 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01485 79 171 RAV Transcription Factor Family AT4G01500 34.409 5.65e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01485 - - lja:Lj6g3v1382150.1 216.083