Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01484 ATGGTCTTCTCAACTGCCTTTCTCCATGAAGATGGCCCCTTTTTTTCTAGAAAAAGGCCAAGAGTGTCAGATCTTGGACATCAAGATATAGATTTACATGCAGATGCAGGAATTTCCAGTGATATTTCCTTGTTCTCGCATCAAGATATAGAAAGGTGCAGGAGTACTGATGATGTTCCCTCTTCCAGCAATACTGACGATAAAGTTGATCCAGATTCTGGAATGGAGATGAGCTGCCCGTCAAATGTTAATAGTGGCTATGTTCCTGTGTGTTCTACCACAGGGCATATTTCACACATGGACCAGAGTTTCTGTGGCTATGTGCAACAGCCTGCTTTTGTGACTGGATGGATGTATGTGAATGAAAATGGGCAAATGTGTGGTCCCTATATTAAGGAGCAGTTATATGAGGGCCTAACTACTGGTTTCTTGCCATCTGAGCTTCCTGTTTATCCAGTGACTAATGGCACAATAATGAACCCTGTACCACTGAATTACTTCAAGCAGTTCCCTGATCATGTTTCCACTGGGTTCGCATATCTGAGTATGGGTATCTCAGGCACAAGGGTGCCTACAATGGCAGTATATGAGCAAGATAGGTCTTTTGAGCATGCTGCTCCTCTGGCTGTTAATCCTGATTCACAGTCAGTTTCACAGTCGCATGTCAATTACTGCATTAAGGAATCCAATCACTTAAATTCAAACTCGGAGGCATTCAAAAGTTTAATATCTTGTCAGATGTTAGGTGTAGAATGCTGTTGGCTATATGAGGATGAGGAGGGTATGAAACATGGGCCACATTCTATTAACGAATTGATTTCCTGGCACTGTCATGGATATCTTAAAGATTCAACAGTGATCTCTCATTCTGACAATAAGTATGACACCTTTGTGCTATTGTCTGCTGTAAATGCATTAAAAGGAGATATCTCTGGAACCATTTGTAGATCAGGTTCCACAAGTAATGAGGTTGGTGATATGGTAAACTTAATGGGTGAAATATCTGAGAACATTTCTTCCCAATTGCACATGGGTATCATGAAAGCTGCTCGCAGAGTTGTGCTAGATGGAATTATTGGTGATATCATTGCAGAATTTGTTACGGAAAAGAAATGTAAGAGGCATAAGCTTGAATCAGCCGACCATACTCCTGAAAACAAGATGTCTAAGTTTTCTGCGGAGATCAGTAAAGGTTTGGCTATTCCCAGTGATCCTGCATCTTCCCACACTTTGGACAATCAGTCTTGTCATGAAAGTTCCAGACTGCCCTCAGCCATTATTAAATCAGTTGGAAGCATTGAAAATTTTTGGTGGTCATATGCTGTTGTTCGCAAGGTACTTCTTGATTATTGCATGCAAGTCATGTGGAATGCAGTGTTTTTTGACACAATAGCAGAATACTTATCTTCCTGGAGGAAAAAGAAGCTTTGGTCTCATCCTAAGCCTCAACCATCTGCTAATGGATGTAAAGATCATACTGAAAAGATTGAATCAGAAGCTTTGGTTCTCAATCCAGATTCTTCTGAAAGCAATGTTGATGGCTATAATCAGTTTGGAGTACCGGCAACAGAAAAAAATCGTCCCGAGTTATTTTCATCTCCTAGTAGCCTCAAAGGTGGAAACTCACTAGAAGGTCAAAAAGTTTCATGTCCTTATGATAACTCTAAAGATTTGACATGCATTCTTGAAACTGTGGAGAATGAGCTTCACTTCTCTTCAAAGGTGTCTTTACCTGATTACATTCGAAGTTTTGTTGAAAAGGAAGTGAACAAATTAATTCCTTTCCCAGAAGAAAACAAATTGAACGAGGTTGCTGTTGGTGACACTCGTTTTTCAGAGATACTTGCTAATAAAACGTCTGTGAAGGAAATTCTAAATGACAAGTCTGGGGATCCTGTAAAAGCTGGAAATTCATTTGGCGAGTCTGCATCTGGAAACCATATGTCTGATGTATTTTCAAAAGCATTTAAGGAGTTGTGTGGATATGTAGATGATGTGGTTGAAGAGGAGATTGATGACCTACCACCTGGACTTGAGAAATCTCAAACAGTTGTCCTGCACTACAATTCGAAATTTCGACCTTCAAGGTCGGTTGAATGTAATCCTAAGATTACAGAATATGTTGCTACTGCATTGTGCCGACAGAAACTGCATGATGATGTTCTGGAAGAATGGAAGTTGTTGTTTGTTGATTCTATGCTCAAGCAAGTTTTTATATCATCAAGTACCATAAAGAAACATTTTAAGGCTGATGGTCATAAGAAAAGAAAAAGGGTCAATGCAAACAAGGAACATTTGAATGGTGCTACTTCTGGACTGGGAAGAGTGAAGGAAGGAGCAAAGAGTTCTTCTGAAGTTCCTCTGGTGATTGAAAAATATACTTATTGCCGCAAGAAGCTGTCACAGAAGGAGTTATTTTCCTCACAATCTGTAGCAGAAAATGATTCTAGGCCAGGGAAGCAGCCTGTGGCCAAGTTAAGGAAACATGTTTCTGGAGATGTTGATGGGGCTGCAGAGGTTAAAATAGCTTCTGTTAAACCTGGAAAGACAAAGATGATTAAAGGGAAGAAGGATACATCTTCTAAGGGCAGATCTTCTGTCAGTGTCAATAGTAGCTCACACAATGATCAATTATCTTTAAAGAATAAAGCTGGTCGAAAAGTGTTGAAGATTTCAGATGATGTTAAGGATGTTGTAAAATCCAATGTAAAGAAGCTTTCAGTGTCAACTGATAATAGCGTTGGCATGAAGAAGGTTGTCAAAAGTGATGGCTATGATGGCACTGTTAAAGAAAAGACCACAGGTCATTGCTCCAGAGAGATACAAAATGCAAAAAATAAAGTATCAAAATCAAAAAGGAAACATCAAATGGATGGTACAACATCTTCACATCCTACAAAGGTTTTGAAAATTTCAAATGGTGATGCTTATCTGGGAGCCAGTAAACAGGTTACTGTCGCAAGGAGGAAGTCTGCTAAATCCAAGCTATTGAATTTGTGTCCTAGATCTGATGGATGTGCTAGGATTTCTATTGATGGTTGGGAATGGCATAAATGGTCTCGAAGTGCCAGTCCTGCATATAAAGCACGTGTTAGGGGTCTTCCGTGTTTCCGGAACAAGTGCATAGATTCTGAAAATAATTTATCTCAGTTGTCAAATGGTAAGGGTCTTTCTGCAAGAACAAATAGAGTGAAATTGCGTAACCTTCTTGCTGCTGCAGAGGGTGCGGATCTTCTGAAAGTGCCTCAATTGAAGGCACGGAAGAAGCGTTTGCGGTTTCAGAGGAGCAAGATCCATGACTGGGGTCTTGTTGCCTTGGAGCCAATTGAGGCAGAGGACTTTGTGATTGAATATATTGGAGAACTAATTCGTCCTCGGATATCTGATATACGTGAACGTCAGTATGAGAAGATGGGAATTGGAAGCAGTTACCTTTTTAGACTTGATGATGGTTATGTGGTTGATGCTACCAAGAGAGGTGGGATTGCAAGATTTATTAACCACTCTTGTGAGCCCAACTGCTATACAAAGGTTATATCTGTTGAGGGTCAAAAGAAGATTTTCATATATGCGAAACGGCATATAGCTGCTGGTGAAGAAATTACATACAATTATAAGTTCCCCTTGGAGGAGAAAAAGATTCCCTGTAACTGTGGTTCCAGAAAGTGTCGTGGATCACTGAATTAG 3687 0.4003 MVFSTAFLHEDGPFFSRKRPRVSDLGHQDIDLHADAGISSDISLFSHQDIERCRSTDDVPSSSNTDDKVDPDSGMEMSCPSNVNSGYVPVCSTTGHISHMDQSFCGYVQQPAFVTGWMYVNENGQMCGPYIKEQLYEGLTTGFLPSELPVYPVTNGTIMNPVPLNYFKQFPDHVSTGFAYLSMGISGTRVPTMAVYEQDRSFEHAAPLAVNPDSQSVSQSHVNYCIKESNHLNSNSEAFKSLISCQMLGVECCWLYEDEEGMKHGPHSINELISWHCHGYLKDSTVISHSDNKYDTFVLLSAVNALKGDISGTICRSGSTSNEVGDMVNLMGEISENISSQLHMGIMKAARRVVLDGIIGDIIAEFVTEKKCKRHKLESADHTPENKMSKFSAEISKGLAIPSDPASSHTLDNQSCHESSRLPSAIIKSVGSIENFWWSYAVVRKVLLDYCMQVMWNAVFFDTIAEYLSSWRKKKLWSHPKPQPSANGCKDHTEKIESEALVLNPDSSESNVDGYNQFGVPATEKNRPELFSSPSSLKGGNSLEGQKVSCPYDNSKDLTCILETVENELHFSSKVSLPDYIRSFVEKEVNKLIPFPEENKLNEVAVGDTRFSEILANKTSVKEILNDKSGDPVKAGNSFGESASGNHMSDVFSKAFKELCGYVDDVVEEEIDDLPPGLEKSQTVVLHYNSKFRPSRSVECNPKITEYVATALCRQKLHDDVLEEWKLLFVDSMLKQVFISSSTIKKHFKADGHKKRKRVNANKEHLNGATSGLGRVKEGAKSSSEVPLVIEKYTYCRKKLSQKELFSSQSVAENDSRPGKQPVAKLRKHVSGDVDGAAEVKIASVKPGKTKMIKGKKDTSSKGRSSVSVNSSSHNDQLSLKNKAGRKVLKISDDVKDVVKSNVKKLSVSTDNSVGMKKVVKSDGYDGTVKEKTTGHCSREIQNAKNKVSKSKRKHQMDGTTSSHPTKVLKISNGDAYLGASKQVTVARRKSAKSKLLNLCPRSDGCARISIDGWEWHKWSRSASPAYKARVRGLPCFRNKCIDSENNLSQLSNGKGLSARTNRVKLRNLLAAAEGADLLKVPQLKARKKRLRFQRSKIHDWGLVALEPIEAEDFVIEYIGELIRPRISDIRERQYEKMGIGSSYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKVISVEGQKKIFIYAKRHIAAGEEITYNYKFPLEEKKIPCNCGSRKCRGSLN 1228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01484 1228 ProSiteProfiles Post-SET domain profile. 1212 1228 IPR003616 -
Pumo2g01484 1228 CDD SET_SETD1 1077 1224 IPR037841 GO:0042800|GO:0048188
Pumo2g01484 1228 Gene3D SET domain 1038 1228 IPR046341 -
Pumo2g01484 1228 SUPERFAMILY SET domain 1084 1225 IPR046341 -
Pumo2g01484 1228 SMART set_7 1089 1212 IPR001214 GO:0005515
Pumo2g01484 1228 MobiDBLite consensus disorder prediction 53 76 - -
Pumo2g01484 1228 MobiDBLite consensus disorder prediction 807 831 - -
Pumo2g01484 1228 MobiDBLite consensus disorder prediction 862 879 - -
Pumo2g01484 1228 SMART PostSET_3 1212 1228 IPR003616 -
Pumo2g01484 1228 Pfam SET domain 1101 1205 IPR001214 GO:0005515
Pumo2g01484 1228 MobiDBLite consensus disorder prediction 944 960 - -
Pumo2g01484 1228 MobiDBLite consensus disorder prediction 53 73 - -
Pumo2g01484 1228 ProSiteProfiles SET domain profile. 1089 1206 IPR001214 GO:0005515
Pumo2g01484 1228 SUPERFAMILY GYF domain 249 305 IPR035445 -
Pumo2g01484 1228 ProSiteProfiles GYF domain profile. 251 307 IPR003169 GO:0005515
Pumo2g01484 1228 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 9 1228 IPR044570 GO:0042800|GO:0051568
Pumo2g01484 1228 Gene3D - 108 178 IPR035445 -
Pumo2g01484 1228 Gene3D - 244 327 IPR035445 -
Pumo2g01484 1228 MobiDBLite consensus disorder prediction 944 966 - -
Pumo2g01484 1228 MobiDBLite consensus disorder prediction 846 881 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01484 Pumo-Chr2 22095040 22119428 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01484 1088 1228 C2H2 Transcription Factor Family AT2G23740 37.423 4.61e-19 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pumo2g01484 SET 1.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01484 - - gmx:100805708 2201.4