Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01473 ATGGAAGAACAAGAAGAGTGCCCAGTTGGGGAAAACAAGGAAACTCCAACTCCTGTTCGAGTTTATGCTGATGGGATTTATGATCTCTTTCACTTCGGCCATGCCCGTTCTCTTGAGCAAGCCAAAAAACTGTTTCCAAACACTTATCTCCTTGTTGGATGCTGCAATGATGAGATCACACATATGTATAAGGGCAAAACTGTCATGACTGATAAGGAACGCTATGAGTCTCTTCGCCACTGCAGGTGGGTTGACGAAGTTATTCCAGATGCACCATGGGTAATCACTCAAGAGTTCCTTGACAAGCATAAAATTGACTACGTGGCACATGATAGTCTTCCTTATGCTGATGCAAGTGGAGCTGGAAAGGATGTGTATGAATTTGTTAAGTCTGTTGGAAAATTTAAGGAAACAAAGCGGACTGAAGCAATTTCTACTTCTGATATCATAATGAGAATTATCAAAGATTACAATCAATATGTAATGCGTAATTTGGACCGTGGTTATACAAGAAAGGAGCTAGGTGTTAGCTATGTCAAGGAGAAGAGGTTGAGAATGAACATGGGACTTAAAAAATTGCAGGAGAGAGTGAAGAAACAACAAGAGAAAGTAGGAAAGAAGATTCAAACGGTGGGAAAAATTGCTGGAATGCACCCTAACGAATGGGTTGAAAATGCTGATCGGTTGGTTGCTGGATTTCTTGAGATGTTTGAAGAAGGCTGCCACAAAATGGGAACAGCAATCAGAGACAGAATACAAGAACGATTAAGGGCACAGCAGCTGAAATCTCTTCTTTATGATGAGTGGGATGATGATGATGAATTCTATGATGATGAATACTACACAGATTAA 852 0.4038 MEEQEECPVGENKETPTPVRVYADGIYDLFHFGHARSLEQAKKLFPNTYLLVGCCNDEITHMYKGKTVMTDKERYESLRHCRWVDEVIPDAPWVITQEFLDKHKIDYVAHDSLPYADASGAGKDVYEFVKSVGKFKETKRTEAISTSDIIMRIIKDYNQYVMRNLDRGYTRKELGVSYVKEKRLRMNMGLKKLQERVKKQQEKVGKKIQTVGKIAGMHPNEWVENADRLVAGFLEMFEEGCHKMGTAIRDRIQERLRAQQLKSLLYDEWDDDDEFYDDEYYTD 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01473 283 Coils Coil 183 210 - -
Pumo2g01473 283 SUPERFAMILY Nucleotidylyl transferase 20 152 - -
Pumo2g01473 283 Gene3D HUPs 3 239 IPR014729 -
Pumo2g01473 283 CDD CCT 18 168 IPR041723 -
Pumo2g01473 283 NCBIfam cytidyltransferase-like domain 20 87 IPR004821 GO:0003824|GO:0009058
Pumo2g01473 283 Pfam Cytidylyltransferase-like 22 151 IPR004821 GO:0003824|GO:0009058
Pumo2g01473 283 PANTHER CYTIDYLYLTRANSFERASE 13 274 IPR045049 GO:0004105|GO:0006657
Pumo2g01473 283 FunFam Choline-phosphate cytidylyltransferase 2 1 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01473 Pumo-Chr2 21993466 22000631 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01473 45 281 Acyl Lipid Metabolism Gene Families AT2G32260 77.917 4.86e-133 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01473 K00968 - gmx:100786249 523.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01473 2 21993466 22000631 Pumo2g01473 2 21993466 22000631 ECH