Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01471 ATGGCCGTTGCCCTATCCCAACCACCCTCTGCATCTCCAGATACCAAAATGAGTGGTAGAGTGGTGTACCCAGTTGAGTATGGTGCAGACCCCACAGGGGCACAAGAGAGCAGTGATGCAATTCTGAAAGCTGTTGGAGATGCTTTTGGGATTGGAAGTGAACTTGAGTTGGTGGCAGGAGTTAAAGACCTTGGAGGGGTTGTGATTGATCTGCAAGGTGGAAACTACACAATCAGCAAACCCATCACATTCCCTTCCTCTGGTGGTGGCAATGTTGTGGTAAAAGGAGGAACATTGAGAGCTTCTGATTCATTCCCCACTGATCGGCATCTAGTTGAGTTATGGGCATCAAATTCCCAAAAGCTTCCAAAAACATCAGTTTTCAACAACATAAAACTTCAGCAACCTAATGCTACAGGGGTGGAGGGATATTCATTAGTTGATTCTGTCAGAACAAGGATCAACAACTGCTTCTTCCTTCATTTCACCACAGAAGGGATTCTAGTTCAAGGTGGCCATGAAACCTTCATATCAAGCAGTTTCCTTGGGCAGCACTCAACAGTTGGTGGAGATCCAGGGGAGAGGGATTTCTCTGGCACTGCCATTGATCTTGCCAGCAATGACAATGCAATCACAGATGTTGCTATTTTCTCTGCAGCCGTAGGGATTGTCCTGAGGGGCCAGGCCAACATGCTCACAGGGGTGCATTGTTATAACAAGGCCACAGGCTTTGGTGGCATTGGCATTTTGGTGAAACTAGCAGGGAATTCACAAACTAGAATTGATAATTGTTACATGGACTATACAGGTATAGTCATGGAAGATCCTGTTCAAGTTCATGTGACTAATGGGTTTTTCTTAGGGGATGCAAACATAGTTTTGAAGTCAATTAATGGACAAGTTTCTGGATTGAATATAGTTAACAATATGTTCACTGGGAACCCCAACAATAAGGTTCCAATTGTAACCCTAGATGGGCAATTCAGTAACATTGACCAAGTGGGGATTGATAGGAACAATGTGATTGGCATGAGCTTGAGATCAACGGTTGGGAAGTTAACTGTGGCTGGAAATGGCACAAAGTGGGTGGCTGATTTTTCAAACGTTTTGCTATTCCCCAATCGGATTAGTAATTTCCAATATTCATTTTATGCACAAGGGGAACCAAGTTTTTGGCACATTCGGTGA 1188 0.4411 MAVALSQPPSASPDTKMSGRVVYPVEYGADPTGAQESSDAILKAVGDAFGIGSELELVAGVKDLGGVVIDLQGGNYTISKPITFPSSGGGNVVVKGGTLRASDSFPTDRHLVELWASNSQKLPKTSVFNNIKLQQPNATGVEGYSLVDSVRTRINNCFFLHFTTEGILVQGGHETFISSSFLGQHSTVGGDPGERDFSGTAIDLASNDNAITDVAIFSAAVGIVLRGQANMLTGVHCYNKATGFGGIGILVKLAGNSQTRIDNCYMDYTGIVMEDPVQVHVTNGFFLGDANIVLKSINGQVSGLNIVNNMFTGNPNNKVPIVTLDGQFSNIDQVGIDRNNVIGMSLRSTVGKLTVAGNGTKWVADFSNVLLFPNRISNFQYSFYAQGEPSFWHIR 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01471 395 FunFam Polygalacturonase QRT3 24 394 - -
Pumo2g01471 395 SUPERFAMILY Pectin lyase-like 20 383 IPR011050 -
Pumo2g01471 395 PANTHER POLYGALACTURONASE QRT3 5 386 IPR039279 GO:0004650
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01471 Pumo-Chr2 21981745 21986295 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01471 - - gmx:100802482 722.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01471 2 21981745 21986295 Pumo2g01471 2 21981745 21986295 ECH