Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01453 ATGCTATGCTCCACCAATGTGATTTTCTTTTTGTCACTTCATATCTTGGACTTTGGATTGCAGGCCATGCTTTTTGGAGGAACAGACTCATCAACTGGAACTTTAGAGTGGTCATTATCTAATTTATTGAATCACCCAGAGGTGTTGCAGAAGGCAAAAGATGAATTGGATGCTCAAGTAGGGCAAGATCGCTTGTTAAATGAGTCAGACCTTCCAAAACTTCCTTATCTTAGGAAGATCATCCTTGAGACACTTAGGTTGTATCCACCGGCTCCAATTCTAATACCACATGTGTCTTCAGAAGATATCACTGTTGAAGGATTCAATGTCCCACGAGACACTATAGTGATCATTAATGGTTGGGGCATGCAAAGAGATCCTCGGTTATGGAATGATGCCACATGCTTTAAACCTGAGAGGTTTGATGTGGAAGGAGAGGAGAAAAAGTTGGTAGCGTTTGGGATGGGAAGAAGGGCTTGCCCAGGAGAACCTATGGCTATGCAAAGCGTCAGCTTTACTTTGGGATTATTGATTCAATGTTTTGACTGGAAACGAGTAAGTGAGGAAAAGCTTGATATGACAGAGAACAATTGGATCACCTTATCAAGGTTGATTCCATTGGAGGCCATGTGCAAGGCTCGCCCTCTTGCCACTAAAATTGGAAGTTATTAA 672 0.4211 MLCSTNVIFFLSLHILDFGLQAMLFGGTDSSTGTLEWSLSNLLNHPEVLQKAKDELDAQVGQDRLLNESDLPKLPYLRKIILETLRLYPPAPILIPHVSSEDITVEGFNVPRDTIVIINGWGMQRDPRLWNDATCFKPERFDVEGEEKKLVAFGMGRRACPGEPMAMQSVSFTLGLLIQCFDWKRVSEEKLDMTENNWITLSRLIPLEAMCKARPLATKIGSY 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01453 223 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 153 162 IPR017972 GO:0005506|GO:0016705
Pumo2g01453 223 PANTHER CYTOCHROME P450 82C3-RELATED 21 214 - -
Pumo2g01453 223 SUPERFAMILY Cytochrome P450 20 214 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo2g01453 223 PRINTS P450 superfamily signature 151 160 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo2g01453 223 PRINTS P450 superfamily signature 26 43 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo2g01453 223 PRINTS P450 superfamily signature 160 171 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo2g01453 223 PRINTS P450 superfamily signature 79 90 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo2g01453 223 Pfam Cytochrome P450 22 201 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo2g01453 223 PRINTS E-class P450 group I signature 119 143 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo2g01453 223 PRINTS E-class P450 group I signature 35 61 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo2g01453 223 PRINTS E-class P450 group I signature 78 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo2g01453 223 PRINTS E-class P450 group I signature 160 183 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo2g01453 223 PRINTS E-class P450 group I signature 150 160 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo2g01453 223 Gene3D Cytochrome P450 13 209 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01453 Pumo-Chr2 21643538 21644406 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01453 14 220 Cytochrome P450 AT4G37360 55.556 5.27e-84 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01453 K13260 - gmx:100789410 404.06