Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01444 ATGGAATGGATCATAGGTGTGTGTGTTTTGATGGGCACGTTCTTGATGAGTTGGTGGATTCTATGTGGCAAGAATGATGAGAATACAGTGGCAAAGGGCAAAGTTCCAAAAGGGAACTCCGGTTGGCCTTTACTCGGAGAGACCCTTGATTTCATTGCTTCTGGCTACACCTCAACCCCTGTCAGCTTCTTGGAAAAGCGCAAGTCTTTGTACGGGAATGTGTTCAAGACATGCATTTTGGGAAGCAATGTGATAGTGTCAACTGACCCGGACGTGAACAAGGTGGTTCTGCAGAACCAAGGCAATAACTTCGTCCCCGCTTATCCAAAATCAATTAGAGAATTAATGGGAGAACAATCCATACTCAAAATGAACGGGACCATGCACAAGAAAGTGCATACACTCATCGCAGGGTTCCTACGATCCCCACAACTCAAAGCTCGAATCACCAGAGACATTGAACACACTGTCAAACAATGCTTCGCTTCTTGGACGCCCCACCAACCAATCTATGTTCAAGATCAAGTCAAAAAGATTACATTTCCTGTTTTAATCAAAGTTCTGATGAGCGTTGGTCCTGGTGAAGATTTGGACTTCCTGTATAGAGAATTTGCAGAATTCATCAAAGGATTGATTTGCTTACCCCTCAAATTTCCAGGAACAAGACTATATAAATCCTTGAAGGCTAAAGATAGGATGGTGAAGATGGTGAGGAAGATAGTAGAGGAGAGGAAGAAACTACTGCAGGATATTAATAATGCAGATGATCATGGTGATGCAGCAGTGAATGATGTGGTGGACGTACTATTACGGGATAAGGGTGACTCCAACTCTAGCTCACGTTTGACTCCAGAAATGATTAGCCAAAACATAATAGAGATGATGATACCAGGAGAGGAGACTCTTCCTACGGCTATGACCATGGCCCTCAAGTTCCTCAGTGACTCCCCTCTCGCTCTATCCAAACTTCAGGAGGAGAACTTGGAACTGAAGAGGCTGAAGACTAATTGCTCACATGATTATGCATGGACTGATTACATGTCACTGCCATTTACTCAAAATGTTATCAGTGAAACTCTTAGAATGGCCAATATTGTCAATGGCATTTGGAGGAAATCAGTCAATGACATAGAAATTAAAGGGTACCTAATTCCGAAACACTGGTGTGTTATGGCATCTCTTACCTCTGTTCACATGGACGGCAAGAACTATGAAAACCCTTTTAAGTTTGATCCATGGAGATGGGAGAAAATTGGAGCTGTGGCTGGTAACAACCGCTTTACCCCATTTGGCGGTGGACATAGACTATGCCCTGGATTAGAACTCTCCAGGCTAGAGCTATCTATTTTCCTTCACCACCTTGTTACTACTTACAGATGGGTCGCTGAGAGGGATGAAATCATTTACTTTCCAACTGTCAAGATGAAGAGGAAGCTCCCAATTAGTGTGCAACCCATTAACGCGTGA 1467 0.4342 MEWIIGVCVLMGTFLMSWWILCGKNDENTVAKGKVPKGNSGWPLLGETLDFIASGYTSTPVSFLEKRKSLYGNVFKTCILGSNVIVSTDPDVNKVVLQNQGNNFVPAYPKSIRELMGEQSILKMNGTMHKKVHTLIAGFLRSPQLKARITRDIEHTVKQCFASWTPHQPIYVQDQVKKITFPVLIKVLMSVGPGEDLDFLYREFAEFIKGLICLPLKFPGTRLYKSLKAKDRMVKMVRKIVEERKKLLQDINNADDHGDAAVNDVVDVLLRDKGDSNSSSRLTPEMISQNIIEMMIPGEETLPTAMTMALKFLSDSPLALSKLQEENLELKRLKTNCSHDYAWTDYMSLPFTQNVISETLRMANIVNGIWRKSVNDIEIKGYLIPKHWCVMASLTSVHMDGKNYENPFKFDPWRWEKIGAVAGNNRFTPFGGGHRLCPGLELSRLELSIFLHHLVTTYRWVAERDEIIYFPTVKMKRKLPISVQPINA 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01444 488 CDD CYP90-like 67 485 - -
Pumo2g01444 488 PRINTS E-class P450 group IV signature 421 437 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo2g01444 488 PRINTS E-class P450 group IV signature 398 416 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo2g01444 488 PRINTS E-class P450 group IV signature 62 85 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo2g01444 488 PRINTS E-class P450 group IV signature 349 365 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo2g01444 488 PRINTS E-class P450 group IV signature 437 455 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo2g01444 488 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo2g01444 488 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo2g01444 488 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo2g01444 488 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo2g01444 488 Gene3D Cytochrome P450 24 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo2g01444 488 PANTHER CYTOCHROME P450 26 35 461 - -
Pumo2g01444 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Pumo2g01444 488 SUPERFAMILY Cytochrome P450 33 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo2g01444 488 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 25 486 - -
Pumo2g01444 488 Pfam Cytochrome P450 36 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01444 Pumo-Chr2 21473306 21481042 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01444 25 459 Cytochrome P450 AT3G13730 50.685 1.15e-161 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01444 K12637 - gmx:100799030 924.85