Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01436 ATGAAAGAAGCAACAATGAGGATTTCAACACTTGAAATTGTGCTCCTTTTGTGCTTTTCTTGTGCACTCTTTTGTCATGGCAATGAAAGCACTACTATGAGAGTGCTTTTGGAGGTAAAATCATCGTTCACTGAAGACCCAGAAAATGTTCTAAGTGATTGGTCAGAGAACAACACCGATTACTGTAGCTGGAGAGGGGTGTCATGTGGGTCAAAGAATTTCAAGTTCAAGTTAGAAGAATCCAAACCTTTGGATGATGACTCGGTGCACCAAGTGGTGGGACTCAACCTGTCCGAGTCATCACTCAGTGGGTCAATATCACCCTCACTCGGTCGTTTGCAAAACCTAATCCACCTTGATCTCTCTTCTAACCGTCTCACTGGTCCCATTCCACCAACCCTCTCCAACCTCACTTCTTTGGAATCTCTCTTTCTCTACTCTAACCAACTCACGGGTCACATCCCAACCGAGTTAGACTCGCTACTGAGTCTCCGAGTTTTGCGAATCGGTGACAACGAACTCACTGGTCCGATTCCCTCTTCACTTGGGTATATGGTCAGCCTTGAGTACATTGGCTTAGCCTCATGCAGACTCACCGGTCCGATTCCACCCGAACTCGGTCGACTCAGTGAGTTGCAATATCTGATTCTGCAGGAAAACGAGTTGACCGGGCCGATTCCGCCCGAGTTGGGGTACTGCTGGAGCCTTCAAGTCTTCTCCGTCGCTGGCAACAGACTCAATGACTCGATCCCGAGTAAACTGAGTCGACTCAGCAAACTTCAAACTCTCAACCTTGCCAACAACAGCTTAACCGGGTCGATTCCGAGTCAACTCGGTGAGCTGAGTGAACTTCGATATCTGAATTTCATGGGGAACAAACTCGAGGGTCGTATTCCACCGTCTTTGGCTCAATTGGGTAACCTTCAAAATCTTGACTTGTCAAGGAATATGCTCAGTGGGGAAATTCCAGAGGAGTTAGGGAACATGGGTCAGTTACAATACTTGGTTCTCTCTGAGAACAAACTCTCTGGGACCATTCCAAGAACCATATGTTCCAATGCAACAAGTTTGGAGAACTTGATGATGTCAGATAGTGGACTTCATGGTGAGATACCAGCTGAGTTGGGTCAGTGCCAATCACTGAAACAACTTGATTTGTCAAACAATTCTCTCAATGGGTCAATACCTATTGAAGTTTATGGATTGTTGGGGCTAACTGATCTCTTGCTTCACAACAACACTTTGGTTGGTTCAATCTCTCCCTCCATAGGGAACCTCACTAACATGCAGACTCTTGCATTGTTTCACAACAATTTGCAGGGTGGTCTCCCCAGAGAGATTGGGAGGCTTGGGAAATTGGAGATACTTTTTCTCTATGATAACCAGTTGTCAGGGAAGATTCCTTTGGAGATTGGAAACTGTTCAAGCTTGCAGATGGTTGATTTATTTGGAAACCATTTCAGTGGGAGAATTCCCTTCACCATTGGGAGGCTGAAAGAGTTGAATTTTTTGCACCTTAGGCAGAATGGGCTTGTGGGTGAGATTCCTGCCACACTTGGGAACTGTCATAAACTGAGTGTGCTTGATTTGGCAGATAATAAGCTCTCAGGTGGCATTCCTGCAACATTTGGATTCCTCAGGGAGTTGAAGCAGTTCATGCTCTACAACAATTCTCTTGAAGGTAGTCTTCCTCACCAACTTGTAAATGTAGCAAACTTGACCAGGGTGAATCTTTCAAACAACACACTGAATGGTAGTTTGGCTGCACTGTGTAGCTCTAGGTCTTTTCTTTCTTTTGATGTCACAGATAATGAATTTGATGGTGAAATACCTTTTCTCCTGGGAAATTCACCCTCCCTTGAGAGGCTGAGATTAGGTAACAACAAATTTTCTGGTGAAATTCCAAGGACATTGGGGAAAATCACCATGTTATCATTGTTAGATCTCTCTGGAAATTCACTCACAGGACCAATACCAGATGAGCTTTCTTTGTGTAATAATCTGACTCACATTGATTTAAACAATAACCTTCTATCTGGACACATACCATCATGGCTTGGAAGTTTGCCTCAGTTGGGAGAGGTTAAGCTCTCCTTCAATCAATTTTCTGGGTCTATTCCACTTGGCCTACTCAAGCAACCAAAGTTGCTGGTTCTTTCCTTGAGTAACAATTCTCTTAATGGAAGTCTCCCAGGCGATATTGGTGATCTTGCATCTCTTAGTATCCTCAGGCTCGACCATAATAATTTCTCTGGACCAATCCCTCATGCAATTGGTAAATTGAGCAATGTTTATGATCTGCAGCTATCCAGGAATGGCTTTAGTGGTGAAATACCAATTGAGATTGGAAGTCTCCAAAATCTCCAAAGCATTTTGGACCTCAGTTACAATAATCTCTCTGGTCATATCCCATCTTCACTTAGCATGCTGTCAAAATTGGAAGTACTTAATCTTTCTCACAATCATCTCACTGGAGAAGTGCCTTTAGTAGTTGGTGAAATGAGGAGCTTGGGAAAGCTTGACATCTCTTACAATAACCTTCAAGGTGCACTGGATAAGCAATTCTCCCGCTGGTCACATGAGGCGTTTGAAGGGAACCTTCATCTTTGTGGAGCCTCTCTTGGAAGCTGCAACAGTGGTGGTGCTTCCAGCAATAAGCGATCAGTCTTAAGCAACACATCAGTGGTTATAGTCTCTGCACTTTCAACTTTAGCTGCAATTGCTCTACTAGTACTTGTAGTGGTCATCTTCATGAAAAACAAGCAAGAATTTTTCAGGAGAGGCAGTGAATTGAGTTTAATTTTCTCCTCCTCATCACGAGCACAAAGACGATCATTGATCCCTCTAACTGTGCCTGGAAAGCGAGAATTCAGGTGGGAAGATATCATGGATGCCACAAACAATCTAAGTGAAGAGTTCATAATTGGCTGTGGAGGTTCTGGGACAGTGTACAGAGTTGAATTGCCCACTGGAGAGACTGTGGCTGTCAAGAAGATTTCATGGAAAGATGATTATCTGTTGCACAAAAGCTTTATAAGAGAACTTAAGACTTTAGGGAGGATCAAGCATAGGCATCTGGTGAAACTGATAGGTTGTTGTAGCAATAGATTTAATGGAGGAGGTTGGAATCTGTTGATATATGAGTATATGGAGAATGGGAGTGTTTGGGATTGGCTACATGGGGAACCCCTCAAATTAAAGGGGATCCTTGATTGGGACACAAGGTTCAGAATTTCTGTGGGATTAGCTCATGGTGTAGAGTACCTCCATCATGATTGTGTGCCAAAGATCATTCACAGGGACATCAAATCCAGCAACATATTGCTAGATTCCAACATGGAGGCACACTTGGGAGACTTTGGTCTGGCAAAAACTCTCATTGAAAATCATGAATCTATTACGGAGTCTAATTCTTGTTTTGCTGGGTCTTATGGGTACATTGCCCCAGAGTATGCATACTCAATGAAGGCAACAGAGAAAAGTGATGTGTACAGCATGGGAATTGTGCTCATGGAACTTGTTAGTGGTAAAACGCCAACAGATGCAGCTTTCAGAGCAGAGATGGACATGGTGAGATGGGTGGAGATGCACGTTGACATGCAAGGCACTGAAGGTGAGGAAGTGATAGATCCTAAGCTGAAACCCCTTTTGCCTGGTGAAGAGTTTGCTGCATTCCAGGTTCTTGAGATAGCCATGCAGTGCACAAAAACTGCACCACAAGAGAGGCCAACGGCACGGCAGGTGTGCGATCTTCTTCTGCGTGTATCCAACAACAAGAAGGTGGAGTTTGAGAAGACGAATTTGGATCATTACTAG 3816 0.4389 MKEATMRISTLEIVLLLCFSCALFCHGNESTTMRVLLEVKSSFTEDPENVLSDWSENNTDYCSWRGVSCGSKNFKFKLEESKPLDDDSVHQVVGLNLSESSLSGSISPSLGRLQNLIHLDLSSNRLTGPIPPTLSNLTSLESLFLYSNQLTGHIPTELDSLLSLRVLRIGDNELTGPIPSSLGYMVSLEYIGLASCRLTGPIPPELGRLSELQYLILQENELTGPIPPELGYCWSLQVFSVAGNRLNDSIPSKLSRLSKLQTLNLANNSLTGSIPSQLGELSELRYLNFMGNKLEGRIPPSLAQLGNLQNLDLSRNMLSGEIPEELGNMGQLQYLVLSENKLSGTIPRTICSNATSLENLMMSDSGLHGEIPAELGQCQSLKQLDLSNNSLNGSIPIEVYGLLGLTDLLLHNNTLVGSISPSIGNLTNMQTLALFHNNLQGGLPREIGRLGKLEILFLYDNQLSGKIPLEIGNCSSLQMVDLFGNHFSGRIPFTIGRLKELNFLHLRQNGLVGEIPATLGNCHKLSVLDLADNKLSGGIPATFGFLRELKQFMLYNNSLEGSLPHQLVNVANLTRVNLSNNTLNGSLAALCSSRSFLSFDVTDNEFDGEIPFLLGNSPSLERLRLGNNKFSGEIPRTLGKITMLSLLDLSGNSLTGPIPDELSLCNNLTHIDLNNNLLSGHIPSWLGSLPQLGEVKLSFNQFSGSIPLGLLKQPKLLVLSLSNNSLNGSLPGDIGDLASLSILRLDHNNFSGPIPHAIGKLSNVYDLQLSRNGFSGEIPIEIGSLQNLQSILDLSYNNLSGHIPSSLSMLSKLEVLNLSHNHLTGEVPLVVGEMRSLGKLDISYNNLQGALDKQFSRWSHEAFEGNLHLCGASLGSCNSGGASSNKRSVLSNTSVVIVSALSTLAAIALLVLVVVIFMKNKQEFFRRGSELSLIFSSSSRAQRRSLIPLTVPGKREFRWEDIMDATNNLSEEFIIGCGGSGTVYRVELPTGETVAVKKISWKDDYLLHKSFIRELKTLGRIKHRHLVKLIGCCSNRFNGGGWNLLIYEYMENGSVWDWLHGEPLKLKGILDWDTRFRISVGLAHGVEYLHHDCVPKIIHRDIKSSNILLDSNMEAHLGDFGLAKTLIENHESITESNSCFAGSYGYIAPEYAYSMKATEKSDVYSMGIVLMELVSGKTPTDAAFRAEMDMVRWVEMHVDMQGTEGEEVIDPKLKPLLPGEEFAAFQVLEIAMQCTKTAPQERPTARQVCDLLLRVSNNKKVEFEKTNLDHY 1271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01436 1271 SUPERFAMILY L domain-like 310 655 - -
Pumo2g01436 1271 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 29 203 - -
Pumo2g01436 1271 Pfam Leucine Rich Repeat 115 137 IPR001611 GO:0005515
Pumo2g01436 1271 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1097 1109 IPR008271 GO:0004672|GO:0006468
Pumo2g01436 1271 Gene3D Ribonuclease Inhibitor 30 196 IPR032675 -
Pumo2g01436 1271 SUPERFAMILY Protein kinase-like (PK-like) 945 1252 IPR011009 -
Pumo2g01436 1271 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 589 880 - -
Pumo2g01436 1271 SMART serkin_6 969 1252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g01436 1271 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 931 1049 - -
Pumo2g01436 1271 Gene3D Ribonuclease Inhibitor 544 881 IPR032675 -
Pumo2g01436 1271 PRINTS Leucine-rich repeat signature 810 823 - -
Pumo2g01436 1271 PRINTS Leucine-rich repeat signature 381 394 - -
Pumo2g01436 1271 ProSiteProfiles Protein kinase domain profile. 969 1253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g01436 1271 ProSitePatterns Protein kinases ATP-binding region signature. 975 998 IPR017441 GO:0005524
Pumo2g01436 1271 Gene3D Transferase(Phosphotransferase) domain 1 1050 1270 - -
Pumo2g01436 1271 SUPERFAMILY L domain-like 614 874 - -
Pumo2g01436 1271 Pfam Leucine rich repeat N-terminal domain 35 69 IPR013210 -
Pumo2g01436 1271 Pfam Protein kinase domain 974 1249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g01436 1271 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 204 300 - -
Pumo2g01436 1271 Gene3D Ribonuclease Inhibitor 296 402 IPR032675 -
Pumo2g01436 1271 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 519 1251 - -
Pumo2g01436 1271 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 301 397 - -
Pumo2g01436 1271 Gene3D Phosphorylase Kinase; domain 1 931 1049 - -
Pumo2g01436 1271 Gene3D Ribonuclease Inhibitor 474 543 IPR032675 -
Pumo2g01436 1271 Gene3D Ribonuclease Inhibitor 404 473 IPR032675 -
Pumo2g01436 1271 Pfam Leucine rich repeat 235 294 IPR001611 GO:0005515
Pumo2g01436 1271 Gene3D Ribonuclease Inhibitor 197 295 IPR032675 -
Pumo2g01436 1271 FunFam Uncharacterized protein 398 491 - -
Pumo2g01436 1271 SMART LRR_typ_2 450 474 IPR003591 -
Pumo2g01436 1271 SMART LRR_typ_2 113 136 IPR003591 -
Pumo2g01436 1271 SMART LRR_typ_2 546 570 IPR003591 -
Pumo2g01436 1271 SMART LRR_typ_2 689 713 IPR003591 -
Pumo2g01436 1271 SMART LRR_typ_2 498 522 IPR003591 -
Pumo2g01436 1271 SMART LRR_typ_2 137 161 IPR003591 -
Pumo2g01436 1271 SMART LRR_typ_2 329 353 IPR003591 -
Pumo2g01436 1271 SMART LRR_typ_2 641 665 IPR003591 -
Pumo2g01436 1271 SMART LRR_typ_2 257 281 IPR003591 -
Pumo2g01436 1271 SMART LRR_typ_2 305 328 IPR003591 -
Pumo2g01436 1271 SMART LRR_typ_2 209 233 IPR003591 -
Pumo2g01436 1271 SMART LRR_typ_2 810 834 IPR003591 -
Pumo2g01436 1271 SMART LRR_typ_2 737 761 IPR003591 -
Pumo2g01436 1271 SUPERFAMILY RNI-like 95 392 - -
Pumo2g01436 1271 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 492 588 - -
Pumo2g01436 1271 FunFam Leucine-rich repeat receptor-like protein kinase 1050 1269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01436 Pumo-Chr2 21267390 21271510 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01436 638 855 Receptor kinase-like Gene Family AT5G56040 30.131 2.08e-14 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pumo2g01436 Pkinase 1.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01436 - - gmx:100797153 2213.34