Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01414 ATGTTTCGTTCCCAACGCTTCAAACCCCTTCTTCTCTATCTGAAGGGCCTCACAACAAGACCACCACTTCAAACCCCTCAACCCAATCCTCCTTTTCCCTCAACACTCTCTCTGAAACACATCTCACTCGCTTCACAGCAACACTCATTCACGGTTTCATACCTCATAAACACCTGCGGCTTCTCACCGGAAACCGCTCTCAAGGTTTCCGAGCGCGTTCGCTTCGAGACCCCTCAGAAGCCCGACTCAGTCATCGCGTTCTTCACAAACAACGGATTCACCAAACCCCAGATAACCAGCATCGCCAAAAGGGTACCCGGCGTGCTCACATGCAACCCCCACACGAGGCTCTCGCCGAAGTTCCAATTTTTACTCTCAAAGGGTGCTTCTCCCTCCGACATCGTTCACCTCGTGAACAGGTGCCCCAGAATCGTAAGCTCGAGCCTCAAAAACAACGTGATCCCCACCTTTGAGCTGGTGAGAAGGTTCCTTCAATCTGATAAGAAAACTATTGATTGTGTGCTCGCTAATAGGCACTTCCTTGATTATAAAATTGCTGCAGAAAATGTGGATATGTTGGTTGATGATGTTGGAGTCAAGGACTCCAACATCACCTATTTGTTCCGTACGAGGCCTTCTATACTCTTGTCTAAAGACTTGAGGAGGACCGTTGATGAGGTTAAGGAAATGGGGTTCGACCCTTCTAAGATAAGTTTTGTGATGGCCTTGCACGCCAAAAGGGGTGTCTCGAAATCGCGGTGGGATGCGAAAGCTGATGCCTTTAAGAGCTGGGGTTGGTCTGAGGAAATGGTTCTTGATACGTTCAGGAGGCATCCCCTCTTCATGTTGACTTCCAAGGATAAGATCAATGAGGTGATGAGATTTTGGGTTGATCAGTTGGGTTGGGACCCTTTGGCCCTCGCCAAAATGCCGAAGATGTTTGGATATAGTATGGAGGGAAGGATCATTCCGAGGGGTTTGGTTGTCCGGTATTTGATCGCGAAGGGTTTGAGAGAGAAGAGTGCCAGCTTGTTTACCCCATTTGCTGTTTCTGAAAAGTTGTTTCTTGAAAATTATGTGATGCGTTTTAATGAGGAAATGTGTCAGCTATCAAAGCTTTACCAGGAAAAAATGAGTTTCCAAGAAAACAGGGAGGATGGCTGTAGCATCTGGCAGTTAGCAAAATGGAAGAGTACATTTTTGTGTGACTCAACCTTGTTATGTTTTTTCATCTCATTTAAGTAG 1245 0.4667 MFRSQRFKPLLLYLKGLTTRPPLQTPQPNPPFPSTLSLKHISLASQQHSFTVSYLINTCGFSPETALKVSERVRFETPQKPDSVIAFFTNNGFTKPQITSIAKRVPGVLTCNPHTRLSPKFQFLLSKGASPSDIVHLVNRCPRIVSSSLKNNVIPTFELVRRFLQSDKKTIDCVLANRHFLDYKIAAENVDMLVDDVGVKDSNITYLFRTRPSILLSKDLRRTVDEVKEMGFDPSKISFVMALHAKRGVSKSRWDAKADAFKSWGWSEEMVLDTFRRHPLFMLTSKDKINEVMRFWVDQLGWDPLALAKMPKMFGYSMEGRIIPRGLVVRYLIAKGLREKSASLFTPFAVSEKLFLENYVMRFNEEMCQLSKLYQEKMSFQENREDGCSIWQLAKWKSTFLCDSTLLCFFISFK 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01414 414 FunFam Mitochondrial transcription termination factor-like 149 367 - -
Pumo2g01414 414 PANTHER CGI-12 PROTEIN-RELATED 46 362 IPR003690 GO:0003690|GO:0006355
Pumo2g01414 414 Pfam mTERF 86 238 IPR003690 GO:0003690|GO:0006355
Pumo2g01414 414 Pfam mTERF 194 355 IPR003690 GO:0003690|GO:0006355
Pumo2g01414 414 Gene3D Transcription termination factor 3, mitochondrial 186 372 IPR038538 -
Pumo2g01414 414 SMART mt_12 135 166 IPR003690 GO:0003690|GO:0006355
Pumo2g01414 414 SMART mt_12 99 130 IPR003690 GO:0003690|GO:0006355
Pumo2g01414 414 SMART mt_12 205 233 IPR003690 GO:0003690|GO:0006355
Pumo2g01414 414 SMART mt_12 304 338 IPR003690 GO:0003690|GO:0006355
Pumo2g01414 414 SMART mt_12 272 303 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01414 Pumo-Chr2 20981369 20983127 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pumo2g01414 mTERF 1.9e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01414 K15032 - gmx:100792944 519.235