Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01411 ATGTTGAATAAACTTCTCCACCTGAAATATGTCACTTCCGCAGCAACATCGCGTTACCCTTTTATCCATCACTACCCATTTCTATTTTCTCTGCGTTTCTGCACAACAACCACTTCAAATTCAAATTCAAATTCACGCTCATTTGCAGAATCCTACCTCATCCACAATTTTGGGTTCACCCCTGAATCTGCTTCCAAAACTTCTGTCACCTACAATTTTTGTTTCCAGACCCCGGAAAAGCCTGAGTCAGTGATCAGGTTCTTCAGAGATCACGGTTTCTCTAACTCCCAAATAAACAATATGGTTAGAAAGTTACCGTGGTTGCTTTCCTGCGACCCTTGCAAAAGGGTATTGCCCAAGTTTGAATTTTTACTCTCAAAAGGTGTTTCTAGCTCTAAAATTGTTGACCTAGTGAGTAAGTACCCTGGATTACTGAATCCAAGCCTGAAGAATAATATAGTCCCAACCTATGAATTGGTATATAGATTCTTGAAATCTGATGAGTACACTGTTGCTTGTTTGTTTGGTAATTCAATTTTCTCTGGTGGCCATTATCTGGCACGCAACATCAGTCTGATGCTTGAGAATGGAATGAGAGAATCAAACATTGCAACATTGCTTCGGAGACGTTGTAAGGCGGTGTTCTCCTCAGCTGATATTCATAAGGTGGTGGAGGAAGTAAAGGATTTGGGGTTTGATCCTTCAAAAACATCTTTTGCTATAGCAATTGTTGCCCTAAAAAGTATGAGTCAAACCTTGTGGAAGGAGAAAGTTGATGTCTTTAAGAAATGGGGTTGGTCCGATGAAGCCTGTCTTGAAGCATTTAGGAGGCACCCTCACTGTATGTTGACATCCATTGACAAAATAAATACTGTGATGAACTTTTGGGTCAATCAGAAGGGGTGGGATGCTTTGGCCCTTGTCCAATGTCCAAAGATTTTTGGGTCTAGTATGGAGAAAACAATCATTCCAAGGGCTCATGTTGTCCAGTATTTAATTGCAAAAGGTTTGTGGAAAAAGAGTGCCAGCCTGCTTACCCCATTTGCTGTTTCTGAAAAGGTGTTTATTGAAAGGTATGTGATATGTTTTAAGGAGGACACATGTGAACTATTAAAGATGTACCACGGAAAAATGAATGTTAAAGGAAAAAAGGAGGATGGTGCAGCATCTGGCAGTTATCAAATGGTTAACTCATGA 1197 0.4018 MLNKLLHLKYVTSAATSRYPFIHHYPFLFSLRFCTTTTSNSNSNSRSFAESYLIHNFGFTPESASKTSVTYNFCFQTPEKPESVIRFFRDHGFSNSQINNMVRKLPWLLSCDPCKRVLPKFEFLLSKGVSSSKIVDLVSKYPGLLNPSLKNNIVPTYELVYRFLKSDEYTVACLFGNSIFSGGHYLARNISLMLENGMRESNIATLLRRRCKAVFSSADIHKVVEEVKDLGFDPSKTSFAIAIVALKSMSQTLWKEKVDVFKKWGWSDEACLEAFRRHPHCMLTSIDKINTVMNFWVNQKGWDALALVQCPKIFGSSMEKTIIPRAHVVQYLIAKGLWKKSASLLTPFAVSEKVFIERYVICFKEDTCELLKMYHGKMNVKGKKEDGAASGSYQMVNS 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01411 398 PANTHER CGI-12 PROTEIN-RELATED 45 364 IPR003690 GO:0003690|GO:0006355
Pumo2g01411 398 SMART mt_12 304 338 IPR003690 GO:0003690|GO:0006355
Pumo2g01411 398 SMART mt_12 272 303 IPR003690 GO:0003690|GO:0006355
Pumo2g01411 398 SMART mt_12 237 267 IPR003690 GO:0003690|GO:0006355
Pumo2g01411 398 SMART mt_12 135 166 IPR003690 GO:0003690|GO:0006355
Pumo2g01411 398 SMART mt_12 204 233 IPR003690 GO:0003690|GO:0006355
Pumo2g01411 398 SMART mt_12 99 130 IPR003690 GO:0003690|GO:0006355
Pumo2g01411 398 FunFam Mitochondrial transcription termination factor-like 149 367 - -
Pumo2g01411 398 Pfam mTERF 249 355 IPR003690 GO:0003690|GO:0006355
Pumo2g01411 398 Pfam mTERF 86 233 IPR003690 GO:0003690|GO:0006355
Pumo2g01411 398 Gene3D Transcription termination factor 3, mitochondrial 171 372 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01411 Pumo-Chr2 20961654 20963118 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pumo2g01411 mTERF 8.4e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01411 K15032 - gmx:102663414 575.474