Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01410 ATGTTTCCTTCCCAACGCTTCAAACCCTTTCTCTACCTCAAGTCACTCATAAGAACACCGCTTCAAGCCCCGAAACCGAATCCATTCCCATCATCAACATTCTCTCTGAAACGCGCCTCAACAACTTCACAGCAACACCCATTCAAGGTTTCCTACCTCGTAAACACATGCGGGTTCTCGCCAGAAACCGCTCTCAGGGCCTCCAAGTTCACTCAGTTCGAAACCGCCGAAAAACCGGACTCGATCATCGCCTTGTTCAGAAACTACGGATTCTCCGACACCCAGATAAACAGCATTGTTAGAAGGGCACCCAACGTGCTCACATGCGACCCCCACAAAAGGGTTCTACCAAAGTTCGAATTTTTACGCTCCAAAGGGGCATCAAGCTCTGACATTGTGGAACTGGTGAGTAAGAGCCCCAGGATCCTGTATGCGAACCTCGAGAATAACATAGTTCCTTCCTATGAATTGGTGCGAAGGTTCCTTGAATCTGATAAGAAAACCATGGGTTGCATACTTGGTTGTGGACATTTCTTTGGTAATGATCGTGCGGCACAAAATGTGAAATTGTTGATTGATGAAGGAGTCACGGACTCCTATTTACTCGCGAAAGGCTTGAGGAAAACCAGTGCCAGCTTGATTACCCCATTTTCTGTTTCTGAAAAGGTGTTTCTTGAAAAGTATGTGATGCGTTTTAAGGAGGAAGAAGCGGAACTATTAAAGCTGTACCAGGGAAAAATGAGTGTTCATGGAAAAAAGGAGGATGGTTAA 771 0.4578 MFPSQRFKPFLYLKSLIRTPLQAPKPNPFPSSTFSLKRASTTSQQHPFKVSYLVNTCGFSPETALRASKFTQFETAEKPDSIIALFRNYGFSDTQINSIVRRAPNVLTCDPHKRVLPKFEFLRSKGASSSDIVELVSKSPRILYANLENNIVPSYELVRRFLESDKKTMGCILGCGHFFGNDRAAQNVKLLIDEGVTDSYLLAKGLRKTSASLITPFSVSEKVFLEKYVMRFKEEEAELLKLYQGKMSVHGKKEDG 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01410 256 SMART mt_12 133 164 IPR003690 GO:0003690|GO:0006355
Pumo2g01410 256 SMART mt_12 97 128 IPR003690 GO:0003690|GO:0006355
Pumo2g01410 256 Gene3D Transcription termination factor 3, mitochondrial 60 241 IPR038538 -
Pumo2g01410 256 FunFam Uncharacterized protein 45 182 - -
Pumo2g01410 256 Pfam mTERF 84 201 IPR003690 GO:0003690|GO:0006355
Pumo2g01410 256 PANTHER CGI-12 PROTEIN-RELATED 45 205 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01410 Pumo-Chr2 20956746 20957900 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pumo2g01410 mTERF 5.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01410 K15032 - gmx:102666739 316.235