Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01409 ATGTTTATTTCCAAGCTCTTCAAACACCTCTATCTGAAGAGAACCATAACAATAACACTTCCATTTCCAACCCCAAAAGCGAATCCTTTTCTATCAGCATTCTCTTCCAAATTCAGCTCCATCACTTCTCAACAACACTCATTCACGGTTTCCTACCTCATAAACAATCATGGGTTCTCACCAGAAACTGCTCTAAAGGCTTCAAAGCTAGTTCGTTTCGACACCACCCAAAAGCCCGATTCAGTCATTGCCTTCTTCAGAAGCCACGGTTTTTCTGACACCCAGATAAATAGCATTGTTAGAAGGGCACCCAATGTGCTCACATGCGACCCCAACAAAAGGGTTTTGCCAAAGTTTGAGTTTTTACGCTCCAAAGGTGCTTCAAGCTCTGAGATTGTAGAGGTGGTGCATAGGAGCCCCAGAATCCTGTACTCAAGCCTCGAGAATAGCATAATCCCTACCTTTGAATTGAAGTGCAGGCTTGGGGCGAGCCTTGGAGCAATAGCAAGGTTCTGCATCATGACTTGGTGTTCAAATGTTCAAGTCATAGAAACTGACCCTTTTGCTCATAGAGATAGGGGTTCATACATTTGA 594 0.4377 MFISKLFKHLYLKRTITITLPFPTPKANPFLSAFSSKFSSITSQQHSFTVSYLINNHGFSPETALKASKLVRFDTTQKPDSVIAFFRSHGFSDTQINSIVRRAPNVLTCDPNKRVLPKFEFLRSKGASSSEIVEVVHRSPRILYSSLENSIIPTFELKCRLGASLGAIARFCIMTWCSNVQVIETDPFAHRDRGSYI 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01409 197 Pfam mTERF 84 151 IPR003690 GO:0003690|GO:0006355
Pumo2g01409 197 Gene3D Transcription termination factor 3, mitochondrial 28 178 IPR038538 -
Pumo2g01409 197 PANTHER CGI-12 PROTEIN-RELATED 44 172 IPR003690 GO:0003690|GO:0006355
Pumo2g01409 197 SMART mt_12 97 128 IPR003690 GO:0003690|GO:0006355
Pumo2g01409 197 SMART mt_12 133 164 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01409 Pumo-Chr2 20952174 20958972 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pumo2g01409 mTERF 2.5e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01409 K15032 - gmx:102666622 177.948