Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01393 ATGGAGGGTTCGGCGGCGCAGAAGAGGAAGCAGCGAGAGTTTGCGTTAGCGTCGGTTTCTGAGGTGTCTTCGGCTTCTTCTTCTGCTTCGCCGGGGGTTGCACTCTTCGCCGGTGACCGTCTTCAAATTCGGAACGAATCTCGCCTTATTGCTCTCAATGCTCATCTTGCAGCTATTCAGCTATTCGGATTAGGTCCTATTGAATCGGTTTGCATGGTGGAAGGGTCTGAGGCTGGCAAAGAGACATCGTATTCCAGTGGAGTTGCTATTCAGTTTAGAAATGAGGAAGAGAGTGAGGCCTTCCATTGTGTATTCCAACAATGGAAGAAGGGATTCGATGTTCAAGGAGGGAACTTACCAAATGGAACTAATGTAATAACTTCTAAAAGCAAATTTGATGAAAAGATAGAGTCATCTTCTGCAAAAATGTATTTTCATTATTATGGACAACTTTTGCATCAGCAAAATATGTTGCAGGACTATGTGAGGACAGGAACCTATTATGCTGCAGTTATTGAGAATCGCACAGATTTCATGGGTCGTGTAGTAGTTGATGTTGGTGCTGGTAGCGGTATTTTGTCACTATTTGCTGCCCAGGCTGGTGCAAAACATGTTTATGCTGTGGAAGCATCTGAAATGGCAGAATATGCACGGAAACTTATAGCTGGGAACCCAATACTGGGTCAACGAATTACAGTTATTAAAGGCAAAGTTGAGGATGTTGAATTGCCAGAGAAAGCTGATATTCTGATATCCGAGCCCATGGGCACCTTGTTAGTTAATGAAAGAATGCTGGAGTCTTATGTCATTGCTAGAGATAGGTTTCTCACCCCTAATGGGAAAATGTTTCCTACAGTGGGAAGGATTCACATGGCTCCTTTCAGTGATGAATATTTGTATGTTGAAATGGCTAATAAGGCCCTGTTTTGGCAGCAACAAAACTATTATGGTGTTGATTTGACTCCCTTACATGGGACTGCGTTTCAAGGATACTTTTCTCAGCCTGTGGTAGATGCTTTTGATCCAAGGTTGTTAATAGCTGCTCCAATGTTCCATGTGATAGACTTTACCAAAATAAAGGAAGAAGAGCTGTATGAAATTGACATTCCTCTCAGATTCACAGCCACTGTGGGTGCCAGGCTACATGGGTTGGCATGTTGGTTTGATGTACTGTTCAATGGAAGTACTGTGCGAAGGTGGCTTACCACTGCCCCTGGTTCACCTACAACCCACTGGTATCAGTTACGCTGTGTTCTCTCGCAGCCAATATATGTCATGGCAGGACAAGAAATTACTGGCAGGATGCACTTGATTGCCCACACTGCTCAGAGTTATACAATCTATTTAACATTGTCAGCTAAAACATGGGGTCCTGGTGCTGAACAAGGAGGGATTCTTCAAACATCGTCCTGTAAACTTGATCTGAAAGAACCTTACTATAGAATGTCTCAACCGCAAGCTTATCCATTAACCCAAGATCAGCAATCTCAACCACTTTTACAGACTCAGGATATACACATCCAATCTCAAGATTTGGATGAGATAATGCAACAGCCTTCACCTAAGTCATGTGCTCAGATTGACTCCCTCATGCAGAATGCATAA 1605 0.433 MEGSAAQKRKQREFALASVSEVSSASSSASPGVALFAGDRLQIRNESRLIALNAHLAAIQLFGLGPIESVCMVEGSEAGKETSYSSGVAIQFRNEEESEAFHCVFQQWKKGFDVQGGNLPNGTNVITSKSKFDEKIESSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVIENRTDFMGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPILGQRITVIKGKVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLTPNGKMFPTVGRIHMAPFSDEYLYVEMANKALFWQQQNYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLIAAPMFHVIDFTKIKEEELYEIDIPLRFTATVGARLHGLACWFDVLFNGSTVRRWLTTAPGSPTTHWYQLRCVLSQPIYVMAGQEITGRMHLIAHTAQSYTIYLTLSAKTWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYPLTQDQQSQPLLQTQDIHIQSQDLDEIMQQPSPKSCAQIDSLMQNA 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01393 534 Gene3D - 286 494 - -
Pumo2g01393 534 Gene3D Vaccinia Virus protein VP39 123 284 IPR029063 -
Pumo2g01393 534 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 137 452 IPR025799 GO:0016274|GO:0018216
Pumo2g01393 534 FunFam Probable histone-arginine methyltransferase CARM1 286 494 - -
Pumo2g01393 534 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 147 458 IPR029063 -
Pumo2g01393 534 CDD AdoMet_MTases 183 286 - -
Pumo2g01393 534 FunFam Probable histone-arginine methyltransferase CARM1 124 284 - -
Pumo2g01393 534 Pfam Ribosomal protein L11 methyltransferase (PrmA) 180 253 - -
Pumo2g01393 534 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 101 467 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01393 Pumo-Chr2 20733676 20743451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01393 144 434 C2H2 Transcription Factor Family AT3G12270 33.861 2.71e-40 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01393 K05931 - gmx:100818828 997.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01393 2 20733676 20743451 Pumo2g01393 2 20733676 20743451 ECH
Pumo4g00365 4 4993966 5002288 Pumo2g01393 2 20733676 20743451 PCT