Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01391 ATGACATATTCTCTTTGGTTAATCTTCCGCTATCCGCGTTGCCTTTTCTTAGTAGCAATGAAAGGGTCAACGGGGATTCAAGTGATTAGAATTTCTGATGTAGTGACAACGTATCAGTCCCTTTACACCGACAGAACTTTGAGCCCTTATGCTTATTCCTCGTTTTTCTCCAAAATAGTGTGGCTTTGGATGAACCCTTTGCTGAATAAAGGGTACCAAACACACCTCAAGCTTGAAGATGTGCCTTCTCTTCCTATTGAGTTCCGAGCAGAGAAGATGTCAGAGCTTTTCAAGAGCAATTGGCCAAAGCCAGAGGAAAACAGCAAGCACCCGGTAGGACTCACCTTGTTCAGATGCTTCTGGAAGCACATAGCCTTCACTGGCTTCCTTGCCGTCATAAGACTTGGAGTTATGTACATTGGTCCAATGCTTATTCAGAGTTTTGTGGACTTCACCTCAAGGAAAGACAGCACCCCCTATGAAGGCCTTGTTCTGATACTGATCCTGTATTTGGCAAAATCAACTGAGGTCCTCTCTGTGCACCAATTCAATTTCCACTCTCAGAAACTAGGCATGCTAATCCGTTCCAGCATCATCACTTCTGTGTACAAAAAGGGTTTGAGATTGTCGAGTTCTTCAAGGCAGGCTCATGGGACTGGCCAGATTGTGAACCACATGTCTGTTGATGCACAGCAACTCTCAGATTTGATGATGCAGTTTCACCCCATATGGTTGATGCCACTGCAAGTGGCTGCAGCCTTGGCCCTTATTTACAGCAACATTGGCGTGTCCGTGTTTGCGGCGCTGCTTGGATCCAGTTTGGTGTTTGTTTTCACTCTCTTTCGCACCAAGAGGACCAACAGCTTCCAGTTCATGATCATGAAGAGCCGTGACTTGAGGATGAAGGCAACTAATGAGTTGCTGAACAACATGCGTGTCATCAAGTTCCAAGCGTGGGAGGAGTACTTTGGCAACAAGATTAAGCAGTTTCGCGAAGCGGAACACGGTTGGATTGGGAAGTTCTTGTACTACTTTGCTGTTAACATGGGGGTTTTGTCCACTGCTCCCTTGTTGGTAACTGTTCTCACATTTGGAAGTGCCACTCTTCTGGGTGTTCCTTTGAATGCTGGCACTGTGTTCACAATCACCTCAGTGATCAAGATTTTGCAAGAGCCGGTGAGGACCTTCCCTCAGGCTCTTATACTGATTTCTCAGGCGATGATTTCCCTTGGGAGGTTGGATGAGTTCATGATGAGCAAGGAAATGGATGAGGGTGCAGTGGAGAGAGTGGAGGGCTGCGACGGCGACAAGGCCGTGGAGATCAAAGATGGGGAATTCTCTTGGGATGATGCAGATGGGAATGTGGCTCTGAAAGTTGAAGAGATGGAAATTAAGAAAGGGGACCATGCTGCTGTTGTGGGAACAGTTGGCTCAGGCAAGTCTTCGTTATTGGCTTCTGTGTTAGGGGAAATGTTCAAGATATCAGGAAAGAAATATTACCTTGCATCTTCTCGGGAATTGACTCGCCTTGATTCTATCACCAAAGCTCCTGTGATTCACCACTTTTCAGAAACCATTGCTGGTGTTCGGTATCGGCCAAATACTCCTCTGGTTCTCAAGGGAATCTCTCTTACCATTGAAGGAGGAGAAAAGATTGGTGTTGTTGGTCGTACAGGGAGTGGAAAATCAACCCTCATACAGGTGTTATTTAGGTTGATTGAGCCTTCAGCTGGGAGAATAACTGTTGATGGAATCAACATTTGCACTGTTGGCCTTCATGATCTGAGGTCTAGATTTGGAATTATTCCTCAAGAGCCTGTCCTCTTTCAAGGAACAGTACGAAGCAACGTTGACCCCCTTGGACTGTATTCAGAAGAAGAAATTTGGAAGAGCCTTGAGCGCTGCCAACTGAAAGATGTGGTGGCTGCAAAGCCAGAGAAACTTGAGGCTTCAGTGGTTGATGGTGGAGACAATTGGAGTGTGGGGCAAAGACAGCTTCTTTGCTTGGGAAGGATCATGCTAAAACGCAGCAAAATACTGTTCATGGATGAGGCAACAGCATCCGTTGATTCACAAACTGATGCTGTGATACAAAAGATCATCCGTGAGGACTTTGCAGATCGTACAATTATCAGCATTGCTCATAGAATACCAACAGTCATGGATTGTGACAAGGTTTTAGTCATTGATGCAGGCTATGCAAAGGAATATGACAAACCATCACGTTTGATAGAAAGGCCTTCACTTTTTGGAGCATTGGTTAAGGAGTACTCGAATAGATCAGCTTAA 2289 0.4557 MTYSLWLIFRYPRCLFLVAMKGSTGIQVIRISDVVTTYQSLYTDRTLSPYAYSSFFSKIVWLWMNPLLNKGYQTHLKLEDVPSLPIEFRAEKMSELFKSNWPKPEENSKHPVGLTLFRCFWKHIAFTGFLAVIRLGVMYIGPMLIQSFVDFTSRKDSTPYEGLVLILILYLAKSTEVLSVHQFNFHSQKLGMLIRSSIITSVYKKGLRLSSSSRQAHGTGQIVNHMSVDAQQLSDLMMQFHPIWLMPLQVAAALALIYSNIGVSVFAALLGSSLVFVFTLFRTKRTNSFQFMIMKSRDLRMKATNELLNNMRVIKFQAWEEYFGNKIKQFREAEHGWIGKFLYYFAVNMGVLSTAPLLVTVLTFGSATLLGVPLNAGTVFTITSVIKILQEPVRTFPQALILISQAMISLGRLDEFMMSKEMDEGAVERVEGCDGDKAVEIKDGEFSWDDADGNVALKVEEMEIKKGDHAAVVGTVGSGKSSLLASVLGEMFKISGKKYYLASSRELTRLDSITKAPVIHHFSETIAGVRYRPNTPLVLKGISLTIEGGEKIGVVGRTGSGKSTLIQVLFRLIEPSAGRITVDGINICTVGLHDLRSRFGIIPQEPVLFQGTVRSNVDPLGLYSEEEIWKSLERCQLKDVVAAKPEKLEASVVDGGDNWSVGQRQLLCLGRIMLKRSKILFMDEATASVDSQTDAVIQKIIREDFADRTIISIAHRIPTVMDCDKVLVIDAGYAKEYDKPSRLIERPSLFGALVKEYSNRSA 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01391 762 Pfam ABC transporter 539 687 IPR003439 GO:0005524
Pumo2g01391 762 FunFam ABC transporter C family member 10 108 421 - -
Pumo2g01391 762 CDD ABCC_MRP_domain2 528 740 - -
Pumo2g01391 762 Gene3D - 433 523 IPR027417 -
Pumo2g01391 762 Gene3D - 524 752 IPR027417 -
Pumo2g01391 762 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 52 494 - -
Pumo2g01391 762 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 125 405 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo2g01391 762 SUPERFAMILY ABC transporter transmembrane region 114 417 IPR036640 GO:0005524|GO:0016020
Pumo2g01391 762 FunFam Multidrug resistance-associated protein member 4 520 757 - -
Pumo2g01391 762 CDD ABC_6TM_ABCC_D1 126 413 IPR044746 GO:0140359
Pumo2g01391 762 SMART AAA_5 548 732 IPR003593 GO:0016887
Pumo2g01391 762 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 508 756 IPR003439 GO:0005524
Pumo2g01391 762 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 389 497 IPR027417 -
Pumo2g01391 762 Gene3D ABC transporter type 1, transmembrane domain 108 422 IPR036640 GO:0005524|GO:0016020
Pumo2g01391 762 Pfam ABC transporter transmembrane region 126 393 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo2g01391 762 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 528 755 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01391 Pumo-Chr2 20701619 20710452 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01391 532 745 Calmodulin-binding Proteins AT2G36910 31.019 3.05e-30 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01391 - K05665 gmx:100804807 903.664