Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01389 ATGGATGAGGGTGCAGTGGAGAGAGTGGAGGGCTGCGATGGCAACACGGCCGTGGAGATCAAAGATGGGGAATTCTCTTGGGATGATGCAGATGGGAATGTGGCTCTGAAAGTTGAAGAGATGGAAATTAAGAAAGGGGGCCATGCTGCTGTTGTGGGAACAGTTGGCTCAGGCAAGTCTTCGTTATTGGCTTCTGTGTTAGGGGAAATGTTAAAGATATCAGGAAAGAAATATTACCTTGCATCTTCTCGGGAATTGACTCGCCTTGATTCTATCACCAAAGCTCCTGTGATTCACCACTTTTCAGAAACCATTGCTGGTGTAATGACCATCCGTGGCTTCAGCAAGCAGAACGCATTTTGTCAAGAAAACATTGACAAAGTCAATGCTAGTCTGAGAATGGATTTCCACAACAATGGTGTTAATGAATGGCTTGGTTTTCGCTTGGACTATATGGGAGTGGTTTTCCTTTGCATTGCCACTGTTTTTATGATCTTTCTGCCAAGTGCTATTATTAAGCCAGAATATGTTGGTTTGTCTTTGTCCTATGGCCTGGCTCACAGTAGTCTCTTGGCATTTACCATAACCATGACTTGCTCTGTTGAGAACAAAATGGTTTCAGTTGAGAGAATAAAGCAGTTCACCAACCTTCCCTCAGAAGCTCCATGGAAAATTGCTGATAAAACTCCTCCTCAGAATTGGCCCAGTCAAGGCATTATTGAGTTACACAATTTGCAGGTTCGGTATCGGCCAAATACTCCTCTGGTTCTCAAGGGAATCTCTCTCACCATTGAAGGAGGAGAAAAGATTGGTGTTGTTGGTCGTACAGGGAGTGGAAAATCAACCCTCATACAGGTGTTATTTAGGTTGATTGAGCCTTCAGCTGGGAGAATAACTGTTGATGGAATCAACATTTGCACTGTGGGCCTTCATGATCTGAGGTCTAGATTTGGAATTATTCCTCAAGAGCCTGTCCTCTTTCAAGGAACAACAACAACAAATGTCATATAA 1011 0.4352 MDEGAVERVEGCDGNTAVEIKDGEFSWDDADGNVALKVEEMEIKKGGHAAVVGTVGSGKSSLLASVLGEMLKISGKKYYLASSRELTRLDSITKAPVIHHFSETIAGVMTIRGFSKQNAFCQENIDKVNASLRMDFHNNGVNEWLGFRLDYMGVVFLCIATVFMIFLPSAIIKPEYVGLSLSYGLAHSSLLAFTITMTCSVENKMVSVERIKQFTNLPSEAPWKIADKTPPQNWPSQGIIELHNLQVRYRPNTPLVLKGISLTIEGGEKIGVVGRTGSGKSTLIQVLFRLIEPSAGRITVDGINICTVGLHDLRSRFGIIPQEPVLFQGTTTTNVI 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01389 336 CDD ABC_6TM_ABCC_D2 77 215 IPR044726 GO:0140359
Pumo2g01389 336 FunFam ATP binding cassette subfamily C member 5 223 332 - -
Pumo2g01389 336 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 333 IPR027417 -
Pumo2g01389 336 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 76 334 - -
Pumo2g01389 336 SUPERFAMILY ABC transporter transmembrane region 77 220 IPR036640 GO:0005524|GO:0016020
Pumo2g01389 336 Pfam ABC transporter 257 332 IPR003439 GO:0005524
Pumo2g01389 336 Gene3D - 223 336 IPR027417 -
Pumo2g01389 336 Gene3D ABC transporter type 1, transmembrane domain 61 221 IPR036640 GO:0005524|GO:0016020
Pumo2g01389 336 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 76 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01389 Pumo-Chr2 20643195 20650019 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01389 238 336 Calmodulin-binding Proteins AT2G36910 34.653 1.93e-15 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01389 - K05665 gmx:100804807 489.574