Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01387 ATGCCGCAGGGCAATGCCGCCGCCGCAGCAGCGCTGCTGGACCACGGCGGCGATGCCGGCGACGCCGTCATGGCGCGGTGGCTGCAGTCCGCCGGCCTGCAGCATCTCGCCTCTCCTCTCGCTTCCACCGCCATCGATCATCGCCTCCTCCCCAACCTTCTCATGCAGGGTTATGGAGCACAGTCTGCTGAGGAGAAGCAGAGGCTTTTAAAGTTAATGAGAAACCTCAATTTTAATGGGGAATCTGGTTCGGAGCCATATACGCCCACCGCTCAATCTTTAGGTGGAGTGGCTGCATCAGATGGGTTTTATTCTTCTGAGTTCAGGGGGGATTTTGGAGCCGGGCTTTTGGATCTTCATGCTATGGATGATACAGAGCTTTTGTCTGAGCATGTAGTTTCAGAACCTTTTGAACCATCACCTTTCATGCCTGGAGATACTAGAGTATTTGAAGACGATTTCAATCCAATTAACAGCAAGCTGGAAATTGGGGAAGCGGATGCTGATGCATCAATTTCTTTACCTATGAATGAAAAAGAGTATAGCACAAGGGAAAATAATGTTGCTAAGATTAGAGTTGTGGTACGCAAAAGACCTTTAAACAAGAAGGAGCTTGCTAAGAAGGAGGATGATATTGTAACTGTGACTGACAATGCATATTTGACAGTCCATGAACCGAAACTAAAGGTTGATTTGACAGCTTATGTGGAGAAGCATGAGTTTTGTTTTGATGCTGTGCTTGATGAGCATGTTACCAATGATGAAGTATACCGAAGTACAGTTGAACCAATTATTCCTACAATATTTGAGCGAACCAAAGCTACCTGTTTCGCTTATGGTCAGACAGGAAGTGGCAAAACATACACAATGCAACCTTTACCACTCAGAGCTGCAGAAGACCTTGTTCGACAGTTGCATCAGCCAGTTTACCGGAATCAGAGATTTAAATTGTGGCTTAGCTACTTTGAGATATATGGTGGAAAACTTTATGATCTTCTTAGTGACAGAAAGAAACTTTGTATGAGGGAAGATGGACGGCAGCAAGTTTGCATTGTAGGACTGCAAGAATTTGAAGTTTCTGATGTACAAATTGTCAAAGAATTCATTGAAAAGGGAAACGCTGCAAGAAGTACAGGATCCACTGGTGCTAATGAGGAGTCCTCTAGGTCACATGCTATCTTACAACTGGCTGTAAAGAAGCACAGTGAAGTGAAAGCGAGCAAGCGAAACAATGATGGGAATGAGGCAAGAAGTGGGAAGGTTGTGGGAAAAATTTCTTTTATTGATCTTGCTGGAAGTGAACGAGGTGCTGACACTACTGATAATGATCGTCAGACACGGATTGAAGGAGCAGAAATCAATAAGAGCCTTTTGGCTTTGAAGGAGTGCATTCGTGCTTTAGACAATGACCAGATCCATATTCCATTTCGGGGAAGCAAACTTACAGAAGTGCTTCGTGACTCCTTTGTGGGTAATTCAAAGACTGTTATGATCTCTTGTATATCTCCAGGTGCTGGGTCGTGTGAACACACACTTAATACCTTGAGATACGCAGATCGGGTTAAAAGTCTATCCAAAAGTGGGAATCCTAGAAAAGATCAGGTCCCAAATCCTGTACCACAAACTAATAATAAGGAGGTTTCATCCACATCATCCCTTCCAACCAGTGCTAGTGCAGAGGATTTTAATGATCAACGTCAAGAGAAAACAATGGATATGGGCAGGAAATTTGTTGAAAAGGAAAATTCTTTGCACAGCTCTGCTGCTGCTGTTGACAAACAGCCATTAACTTTTTCTTCAAATTACCTAACAAATGGGCGAGAGGATAAAGGCTTTCCTTCAGCTTCAGTGGACAGGGAGAGGTTTGAAGTGAAGAACTCACATGGTGACTCTACCAGTCAAAAGATGAACTCTTATTCACAAAGTGATACGGATGAGAAAGTGCAAAAGGTGTCTCCCCCACGCAGAAAAGCGTCTAAGGATGAAAAATCCGAAAGGCCTGCTAACTGGATGAAAAAGGATGCCAATGGCTCTGATCTCTTCACTACAAGCTCCAAGCAGCAGAGCACAGGGAATTATAGCACTGTGTCTAAGGATGAAAAGTCTGAAAGGCCTGCAAATTGGATGAGAAGGGATGCCAATGGTTCTGATCTCGTCACTACAAGCTCCAAGCAGCAGAGCACCGGGAGCACTGTGTCTAAGGATGAAAAGTCTGAACGGCCTGCAAACTGGATGAAAAGGGATGCCAATGGCTCTGATCCCTTCACTACAAGCTCCAAGCATCAGAGCACAGGGAATTATAATAATATTACCACTGGATCCAGGCTTAATGAAGCAGAACCCTCTCCTGACGGGAATATCAGTGCAGTACTTGAGGAGGAAGAAGCACTAATTGCTGCTCATAGGAAAGAAATTGAGGATACGATGGAGATTGTTCGTGAAGAAATGAAACTCTTGGCAGAAGTGGACCAACCGGGAAGCCTTATTGACAACTATGTAACCCAATTGAGCTTTGTGCTCTCTCGCAAAGCAGCTAGTCTCGTTGGTCTTCAAGCTCGTCTTGCAAGATTCCAACATCGACTAAAAGAGCAAGAAATTCTAAGTAGAAAAAGAGTTCCCCGTCAATAA 2628 0.4433 MPQGNAAAAAALLDHGGDAGDAVMARWLQSAGLQHLASPLASTAIDHRLLPNLLMQGYGAQSAEEKQRLLKLMRNLNFNGESGSEPYTPTAQSLGGVAASDGFYSSEFRGDFGAGLLDLHAMDDTELLSEHVVSEPFEPSPFMPGDTRVFEDDFNPINSKLEIGEADADASISLPMNEKEYSTRENNVAKIRVVVRKRPLNKKELAKKEDDIVTVTDNAYLTVHEPKLKVDLTAYVEKHEFCFDAVLDEHVTNDEVYRSTVEPIIPTIFERTKATCFAYGQTGSGKTYTMQPLPLRAAEDLVRQLHQPVYRNQRFKLWLSYFEIYGGKLYDLLSDRKKLCMREDGRQQVCIVGLQEFEVSDVQIVKEFIEKGNAARSTGSTGANEESSRSHAILQLAVKKHSEVKASKRNNDGNEARSGKVVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMISCISPGAGSCEHTLNTLRYADRVKSLSKSGNPRKDQVPNPVPQTNNKEVSSTSSLPTSASAEDFNDQRQEKTMDMGRKFVEKENSLHSSAAAVDKQPLTFSSNYLTNGREDKGFPSASVDRERFEVKNSHGDSTSQKMNSYSQSDTDEKVQKVSPPRRKASKDEKSERPANWMKKDANGSDLFTTSSKQQSTGNYSTVSKDEKSERPANWMRRDANGSDLVTTSSKQQSTGSTVSKDEKSERPANWMKRDANGSDPFTTSSKHQSTGNYNNITTGSRLNEAEPSPDGNISAVLEEEEALIAAHRKEIEDTMEIVREEMKLLAEVDQPGSLIDNYVTQLSFVLSRKAASLVGLQARLARFQHRLKEQEILSRKRVPRQ 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01387 875 PRINTS Kinesin heavy chain signature 474 495 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo2g01387 875 PRINTS Kinesin heavy chain signature 271 292 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo2g01387 875 PRINTS Kinesin heavy chain signature 381 398 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo2g01387 875 PRINTS Kinesin heavy chain signature 424 442 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo2g01387 875 Pfam Kinesin motor domain 196 523 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo2g01387 875 MobiDBLite consensus disorder prediction 601 785 - -
Pumo2g01387 875 MobiDBLite consensus disorder prediction 612 628 - -
Pumo2g01387 875 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 524 IPR027417 -
Pumo2g01387 875 CDD KISc_KIF2_like 190 522 - -
Pumo2g01387 875 MobiDBLite consensus disorder prediction 524 565 - -
Pumo2g01387 875 Coils Coil 791 822 - -
Pumo2g01387 875 Gene3D Kinesin motor domain 169 527 IPR036961 -
Pumo2g01387 875 PANTHER KINESIN-RELATED PROTEIN 6 18 872 IPR027640 GO:0003777|GO:0007018
Pumo2g01387 875 MobiDBLite consensus disorder prediction 648 672 - -
Pumo2g01387 875 MobiDBLite consensus disorder prediction 676 696 - -
Pumo2g01387 875 MobiDBLite consensus disorder prediction 750 781 - -
Pumo2g01387 875 FunFam Kinesin-like protein 169 527 - -
Pumo2g01387 875 ProSitePatterns Kinesin motor domain signature. 423 434 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pumo2g01387 875 Coils Coil 847 867 - -
Pumo2g01387 875 MobiDBLite consensus disorder prediction 629 647 - -
Pumo2g01387 875 ProSiteProfiles Kinesin motor domain profile. 190 524 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo2g01387 875 MobiDBLite consensus disorder prediction 714 732 - -
Pumo2g01387 875 MobiDBLite consensus disorder prediction 528 561 - -
Pumo2g01387 875 SMART kinesin_4 188 530 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01387 Pumo-Chr2 20612558 20622004 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01387 176 524 Calmodulin-binding Proteins AT5G65930 33.149 3.99e-43 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01387 K10393 - gmx:100800014 1606.65