Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01382 ATGGAAGGTAACAAGGACGAAGCATTGCGCTGCGTTCGCATCGCCGAAGAAGCAATCGCGTCCGGGAACAAAGACCGCGCCCTCAAATTCCTCAAAATCGCGCAGCGCCTCAACCGCGATTTGCCCCTCCAATCCCTGCTCGACAAGTGCGACCGCCTCGATTCTCACTCCTCCGCCGCCGCCGCCGCCGCAGCAGGCAGGCGCTCCGGCCAAAAACCCCTCGCGAAGCGGCAGCGAGGGGAAATCAAAGGAAAGAGCGATTACTACGCGATTCTGGGATTGGAGAAGAGTTGCTCCGTGGAAGAGATTCGAAGAGCGTATCGGAAGCTCTCTCTGAAGGTTCATCCCGATAAGAACAAAGCGCCGGGCTCCGAAGACGCGTTCAAAAAAGTTTCGAAGGCGTTCAAGTGTTTGAGCGACGATGGTTCTAGAAGGATGTACGACCAGACCGGAACCGCCGACGATTTCGAGAACTCCGAGGTAAACACCTTCCGGCGAAGAAGAAGAAGAACAGCAACAACAACGCACGATTTCTTCGAAGAGGAGTTCGATCCCGACGAGATATTCAGGGCGTTCTTCGGACACTCCGACGTGTTCGGGAGGAACAACCACGTCTACCGGACTCGCGGGATGGGGAATCAGCATCAGCATAGGCACGAATTCAATGCTGGGTCGGGAGGGAGGCATCACAATGTGATGCTTCTGATTCAGCTCTTGCCGTTTTTGATTATTGTGTTGCTCGCGTACTTGCCGTTTTCTGAGCCTGAGTATTCCTTGCACAAGCATTACAACTACCAGATTCCGAAGACCACGGAGCGGCACGGGGTGCAGTTCTTCGTGAAGTCGCAGGCGTTTGAGGCGAATTATCCACCGGGGAGTGATGCTCGGGAGGTGGTTGAGGAGAGCGTGATAAAGGATTATAGGAGTATGCTGAGAAGATACTGTCAGGTGGAGATGCAGAGACGGAGTTGGAACAGGAATCTGCCTGCTCCTCACTGTGATAAGCTGCAGAAGTTTGCAGTGGTGGCATGA 1032 0.5426 MEGNKDEALRCVRIAEEAIASGNKDRALKFLKIAQRLNRDLPLQSLLDKCDRLDSHSSAAAAAAAGRRSGQKPLAKRQRGEIKGKSDYYAILGLEKSCSVEEIRRAYRKLSLKVHPDKNKAPGSEDAFKKVSKAFKCLSDDGSRRMYDQTGTADDFENSEVNTFRRRRRRTATTTHDFFEEEFDPDEIFRAFFGHSDVFGRNNHVYRTRGMGNQHQHRHEFNAGSGGRHHNVMLLIQLLPFLIIVLLAYLPFSEPEYSLHKHYNYQIPKTTERHGVQFFVKSQAFEANYPPGSDAREVVEESVIKDYRSMLRRYCQVEMQRRSWNRNLPAPHCDKLQKFAVVA 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01382 343 CDD DnaJ 87 140 IPR001623 -
Pumo2g01382 343 SMART dnaj_3 86 143 IPR001623 -
Pumo2g01382 343 PANTHER AT29763P-RELATED 1 338 - -
Pumo2g01382 343 PRINTS DnaJ domain signature 107 122 IPR001623 -
Pumo2g01382 343 PRINTS DnaJ domain signature 123 143 IPR001623 -
Pumo2g01382 343 PRINTS DnaJ domain signature 143 162 IPR001623 -
Pumo2g01382 343 PRINTS DnaJ domain signature 89 107 IPR001623 -
Pumo2g01382 343 Pfam DnaJ domain 87 148 IPR001623 -
Pumo2g01382 343 ProSiteProfiles dnaJ domain profile. 87 151 IPR001623 -
Pumo2g01382 343 Gene3D DnaJ domain 84 205 IPR036869 -
Pumo2g01382 343 Pfam Domain of unknown function (DUF1977) 253 323 IPR015399 -
Pumo2g01382 343 SUPERFAMILY Chaperone J-domain 84 194 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01382 Pumo-Chr2 20580033 20581113 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01382 4 148 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 27.517 5.92e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01382 K09518 - gmx:100820432 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01382 2 20580033 20581113 Pumo2g01382 2 20580033 20581113 ECH