Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01361 ATGGGTGGACATAACAATGGCCATGAACAACAAAGAAGGTTTGCCATTCTTGGCATCTCTTCAATCCTCATTGTGGCTATGGTTCCTGTTGCAGTGGCTTTTGGTCCACATCCTTTAGGTGAAACTAAAGGAGAAGATCAAGGGCAAAACTTCAATGTCTTAAACACCAAGAGCAGTGGAAACATGTTTTGCCAAGCAACACAGTTCCAAGAAATGTGCGAGAAAAGCCTTGGCAGTGCATTTTTCGTAGTCACGGACCCGAAGAAGCTCGTCAAAGCTGGGTTCAATGCCACAGTGGTGGAACTTTTGAGCCATATAACCAACTCCACCCTTTATAATGAGATGGCCACAGATAACCTAACAAGACAAGCTATGGATATTTGTACAGAAGTCTTGGACTATGCGGTTGATGGCATTCTCAAATCTACTGACATATTGGACAATGTTGAATTTAAAAAGTTGAGTGATCATGTTTATGACCTCAAGGTTTGGCTCACGGGGAGTATTTCTCACCAATATACTTGCTTGCAAGGTTTTGAGCTCGTAAAAGATGCAAAAAAAGTTGGTGAATCAATGGCTAAGGTTTTGAGTGCCTCTTTGGAGCTTAGTAGCAATGCATTGGATATGATGAATACAGTCTCTAAATTACTTGATCATTTTCCCACAAATAATAATAAATTAATTGGCAGTAGGAGACTTCTCTCTGAGGAAGCAACAGTAGAGGATGGTTTCCTTTCGTGGGTGAATGAAGGTTCACGTCGTTTTCTCCAGGATGCGTTGGGAAGTCTTAAGCCCAATGCAATTGTGGCCCAAGATGGGTCTGGCCAATTTAAAACACTCAATGAAGCTCTTAAGACTGTTCCCCCTAAGAATGCTAAACCTTTTGTGATTCATGTCAAGGCCGGTGTGTACAATGAAATTGTGAATGTGTCTAGGGAGATGACCCATGTCACAGTTATTGGAGATGGTCCTACACAAACCAAATTCACTGGCAATTTAAACTTTGTTGATGGTGTCTCAACTTTCAATAGTGCTACCTTTGGCGTTAATGGTGCCAACTTCATGGCCAAAGATATTGGAATTGAAAACACAGCAGGGGCTGCGAAACAACAAGCAGTAGCACTTTTAGTAACAGCAGACCAAGCTGTTTTCTACAATTGTCACATAGACGCGTTCCAAGACACTCTTTATGCCCAATCCCAACGCCAATTCTACCGTGACTGCACCATCAGTGGCACCATTGACTTTATCTTTGGTGACGCCTTTGGAGTGTTCCAAAACTGCACACTATTTGTGAAAAACCCCTTAAAGGGTCAACGATGCATGGTGACAGCAGATGGCAGAAACAAAGCTGATAGCCCTAGTGCCTATGTGTTTCAAAACTGCTACTTCACAGGGGATGCCGAGATGCTTGCTGCAGAACCTAAGCTAGCATTCCTTGGAAGACCATGGACGCCATATAGCAAGGTGGTCATCATGGACTCTCTAATTGACAATGTCTTCTTAGCAGAAGGGTATGAGGCATGGATGGGAAAAGCAAACAAGGACACGTGTGTGTATTATGAGTATAATAACAAGGGCCCTGGTGCTGACACGTCAAAAAGAGTTCAATGGCCAGGTTTTAAGGTCCTTACCTCTGCTGAAGCAAATGATTATTATCCCGGCAAGTTCTTTGAACTTGCTAATTTACCTCAACGTGATGCTTGGATTGTTGATGCTGGGATACCCTACTCTCTTGGCCCTATGAAGGATGCCCCTACAGGAGGATCGGCCCAAAGTGCTACAGCCTCGGCCCAGAGTCCTACAACCTCAGCTACAGCCTCGGCCCAAAGTCCTACAACCTCAGCCCAAAGTCCTACAACCTCAGCCCAAGCATAA 1878 0.4398 MGGHNNGHEQQRRFAILGISSILIVAMVPVAVAFGPHPLGETKGEDQGQNFNVLNTKSSGNMFCQATQFQEMCEKSLGSAFFVVTDPKKLVKAGFNATVVELLSHITNSTLYNEMATDNLTRQAMDICTEVLDYAVDGILKSTDILDNVEFKKLSDHVYDLKVWLTGSISHQYTCLQGFELVKDAKKVGESMAKVLSASLELSSNALDMMNTVSKLLDHFPTNNNKLIGSRRLLSEEATVEDGFLSWVNEGSRRFLQDALGSLKPNAIVAQDGSGQFKTLNEALKTVPPKNAKPFVIHVKAGVYNEIVNVSREMTHVTVIGDGPTQTKFTGNLNFVDGVSTFNSATFGVNGANFMAKDIGIENTAGAAKQQAVALLVTADQAVFYNCHIDAFQDTLYAQSQRQFYRDCTISGTIDFIFGDAFGVFQNCTLFVKNPLKGQRCMVTADGRNKADSPSAYVFQNCYFTGDAEMLAAEPKLAFLGRPWTPYSKVVIMDSLIDNVFLAEGYEAWMGKANKDTCVYYEYNNKGPGADTSKRVQWPGFKVLTSAEANDYYPGKFFELANLPQRDAWIVDAGIPYSLGPMKDAPTGGSAQSATASAQSPTTSATASAQSPTTSAQSPTTSAQA 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01361 625 CDD PMEI-like_3 63 215 - -
Pumo2g01361 625 SMART PMEI_2 55 209 IPR006501 GO:0004857
Pumo2g01361 625 Pfam Pectinesterase 266 558 IPR000070 GO:0030599|GO:0042545
Pumo2g01361 625 PANTHER PECTINESTERASE 23 570 - -
Pumo2g01361 625 ProSitePatterns Pectinesterase signature 1. 291 310 IPR018040 -
Pumo2g01361 625 FunFam Pectinesterase 4 263 581 - -
Pumo2g01361 625 SUPERFAMILY Pectin lyase-like 264 558 IPR011050 -
Pumo2g01361 625 MobiDBLite consensus disorder prediction 588 625 - -
Pumo2g01361 625 Gene3D - 263 582 IPR012334 -
Pumo2g01361 625 Pfam Plant invertase/pectin methylesterase inhibitor 63 209 IPR006501 GO:0004857
Pumo2g01361 625 MobiDBLite consensus disorder prediction 583 625 - -
Pumo2g01361 625 Gene3D Invertase/pectin methylesterase inhibitor family protein 57 214 IPR035513 -
Pumo2g01361 625 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 63 213 IPR035513 -
Pumo2g01361 625 ProSitePatterns Pectinesterase signature 2. 410 419 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01361 Pumo-Chr2 20339283 20341590 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01361 3 622 Carbohydrate Esterase AT3G05610 39.746 4.06e-162 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01361 K01051 - gmx:100785214 813.142