Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01360 ATGGGTGGACATAACAATGGCCATGAACAACAAAGAAGGTTTGCCATTCTTGGCATCTCTTCAATCCTCATTGTGGCTATGGTTCCTGTTGCAGTGGCTTTTGGTCCAAATCCTTTAGGTGAAACTAAAGGACAAGATCAAGGGCAAAACTTCAATGTCTTAAACACCAAGAGCAGTGGAAACATGTTTTGCCAAGCAACACAGTTCCAAGAAATGTGCAAGAAAAGCCTTGGCAGTGCATTTTTCGTAGTCACGGACCCGAAGAAGCTCGTCAAAGCTGGGTTCAATGCCACAGTGGTGGAACTTTTGAGCCATATAACCAACTCCACCCTTTATAATGAGATGGCCACAGATAACCTAACAAGACAAGCTATGGATATTTGTACAGAAGTTTTGGACTATGCGGTTGATGGCATTCTCAAATCTACTGACATATTGGACAATGTTGAATTTAAAAAGTTGAGTGATCATGTTTATGACCTCAAGGTTTGGCTCACGGGGAGTATTTCTCACCAATATACTTGCTTGCAAGGTTTTGAGCTCGTAAAAGATGCAAAAAAAGTTGGTGAATCAATGGCTAAGGTTTTGAGTGCCTCTTTGGAGCTTAGTAGCAATGCATTGGATATGATGAATACAGTCTCTAAATTACTTGATCATTTTCCCACAAATAATAATAAATTAATTGGCAGTAGGAGACTTCTCTCTGAGGAAGCAACAGTAGAGGATGGTTTCCTTTCATGGGTGAATGAAGGTTCACGTCGTTTTCTCCAGGATGCGTTGGGAAGTCTTAAGCCCAATGCAGTTGTGGCCCTAGATGGGTCTGGCCAATTTAAAACACTCAATGAAGCTCTTAAGACTGTTCCCCCTAAGAATACTAAACCTTTTGTGATTCATGTCAAGGCTGGTGTGTACAATGAAATTGTGAATGTGTCTAGAGACATGACCCATGTCACAGTTATTGGAGATGGTCCTACAAAGACTAAATTCACTGGCAGTTTAAACTTTGTTGATGGTGTCCAAATTTTCAACAGTGCTACCTTCGGCGTTAATGGTGCCAACTTCATGGCCAAAGATATTGGAATTGAAAACACAGCAGGGGCTGCGAAACAACAAGCAGTGGCACTTTTAGTAACAGCAGACCAAGCTGTGTTTTATAATTGTCACATAGACGGGTTCCAAGACACTCTTTTTGCCCAATCCCAACGCCAATTCTACCGTGATTGCACCATCAGTGGCACCATTGACTTCATCTTTGGTGACGCCTTTGGAGTGTTCCAAAACTGCAAACTAATTGTGAAAAGCCCCTTAAAGGGTCAACGATGCATGGTGACAGCAGGTGGCAGAACCAAAGCTGATAGCCTTAGTGCCTTGGTGTTTCACAACTGCGTCTTCACAGGGGATGCCGAGATGCTTGCTGCAGAACCTAAGCTAGCATTCCTTGGAAGGCCATGGATGCCATATTCTAAGGTGGTCATCATGGACTCTCAAATTGACAATGTCTTTTTACCAGAAGGGTATGAGGCATTCATGGGACATGCAAACAAGGACACGTGTACATATTTTGAGTATAATAACAAGGGCCCTGGTGCTGACACATCAAAAAGAGTTCAATGGCCAGGTTTTAAGGTCCTTACCTCTGCTGAAGCAAATGATTATTATCCCGGCAAGTTCTTTGAACTTGCTAATTCAGCTCAACGTGATGGTTGGATTGTTGATGATGGGATACCCTACTCTCTTGGCCCTATGCAGAATGCCCCTACAGGAGGATTGGCCCAAAGTCCTACAACCTCGGCCCAGAGTCCTACAACCTCAGCCCAAAGTCCTACAACCTCAGCCTAA 1839 0.4334 MGGHNNGHEQQRRFAILGISSILIVAMVPVAVAFGPNPLGETKGQDQGQNFNVLNTKSSGNMFCQATQFQEMCKKSLGSAFFVVTDPKKLVKAGFNATVVELLSHITNSTLYNEMATDNLTRQAMDICTEVLDYAVDGILKSTDILDNVEFKKLSDHVYDLKVWLTGSISHQYTCLQGFELVKDAKKVGESMAKVLSASLELSSNALDMMNTVSKLLDHFPTNNNKLIGSRRLLSEEATVEDGFLSWVNEGSRRFLQDALGSLKPNAVVALDGSGQFKTLNEALKTVPPKNTKPFVIHVKAGVYNEIVNVSRDMTHVTVIGDGPTKTKFTGSLNFVDGVQIFNSATFGVNGANFMAKDIGIENTAGAAKQQAVALLVTADQAVFYNCHIDGFQDTLFAQSQRQFYRDCTISGTIDFIFGDAFGVFQNCKLIVKSPLKGQRCMVTAGGRTKADSLSALVFHNCVFTGDAEMLAAEPKLAFLGRPWMPYSKVVIMDSQIDNVFLPEGYEAFMGHANKDTCTYFEYNNKGPGADTSKRVQWPGFKVLTSAEANDYYPGKFFELANSAQRDGWIVDDGIPYSLGPMQNAPTGGLAQSPTTSAQSPTTSAQSPTTSA 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01360 612 CDD PMEI-like_3 63 215 - -
Pumo2g01360 612 MobiDBLite consensus disorder prediction 585 612 - -
Pumo2g01360 612 Gene3D - 263 582 IPR012334 -
Pumo2g01360 612 Pfam Plant invertase/pectin methylesterase inhibitor 63 209 IPR006501 GO:0004857
Pumo2g01360 612 FunFam Pectinesterase 4 263 581 - -
Pumo2g01360 612 Pfam Pectinesterase 266 558 IPR000070 GO:0030599|GO:0042545
Pumo2g01360 612 ProSitePatterns Pectinesterase signature 1. 291 310 IPR018040 -
Pumo2g01360 612 Gene3D Invertase/pectin methylesterase inhibitor family protein 57 214 IPR035513 -
Pumo2g01360 612 SUPERFAMILY Pectin lyase-like 264 559 IPR011050 -
Pumo2g01360 612 PANTHER PECTINESTERASE 23 570 - -
Pumo2g01360 612 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 63 213 IPR035513 -
Pumo2g01360 612 SMART PMEI_2 55 209 IPR006501 GO:0004857
Pumo2g01360 612 MobiDBLite consensus disorder prediction 581 612 - -
Pumo2g01360 612 ProSitePatterns Pectinesterase signature 2. 410 419 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01360 Pumo-Chr2 20313250 20315476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01360 3 608 Carbohydrate Esterase AT3G05610 39.573 8.32e-157 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01360 K01051 - gmx:100785214 824.698