Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01353 ATGGCGACGGAGCAGTTAATGTCCGCCGGCGGCCCCCGCTACGTCCAAATGAAATCGTCTCCGCCGCCGTCGCCGCCGGCCGCGGCTGCCGAGGAGATGTCGTCGGTCCCGTCGTTCCGGCACAGCTGCGCCGAGGCCAATCGGATTTTCGAGGAATTGCCGAAAGCCTCCATCGTCTCCGTCTCTCGCCCCGACGCCAGCGACATCAGCCCCATGCAACTCTCTTACACCATTCAGGTTCAGTACAAACAGTTCAAGTGGGAGCTAACAAAGAAAGCCCATCAAGTATTTATTTTGCATTTCGCATTAAAGAAACGTGCCTTTATTGAGGAAATCCACGAGAAGCAAGAACAGGTTAAAGAATGGCTTCAAAATCTAGGAATTGGAGATCACACTCCTATGGTGCAAGATGACGATGAAGGTGATGATGATACTGTCCCGTTGCATACTGAAGAAACTCATGAAAGTGCCAAGGACAGAGATGTTCCATCTAGTGCTGCTCTACCAATAATACGGCCAGCCTTGGGAAGACAGCATTCTATTGCAGACAGGGCAAAGAGAGCAATGCAAGGATATCTGAATCACTTTTTGGGAAATATCAGTATTGTGAACTCTCGTGAGGTTTGCAAGTTTTTGGAGGTATCAAAGTTATCTTTTTCACCTGAATATGGTCCTAAGCTGAAGGAAGAATATGTGATGGTGAAGCATCTACCCAAAATCCAGAAGGATGATGATTCCAGAAAGTGTTGTTTGTCTGACTGTTTTAGTTGCTGTAATGACAACTGGCAAAAGGTATGGGCTGTACTGAAACCTGGATTCTTGGCATTGCTGGCAGACCATTTCGATACACAGCCACTGGACATCATTGTTTTTGATGTACTGCCTGCCTCGGATGGGAATGGGGATGGTCGATTATCACTGGCGAGTGAAATGAAGGAACGAAATCCCTTACGCCATTCATTCAAGGTGACTTGTGGAATCCGGAGCATCAGAATTAGAGTGAAAAGTAGTAGTAAAGTTAAAGATTGGGTTGCTGCAATTAATGATGCTGGACTCAGGCCTCCTGAAGGCTGGTGTCATCCTCACCGTTATGGTTCATTTGCTCCTCCAAGAGGCTTAGTTGAAGATGGAAGTCAAGCCCAGTGGTTCATTGATGGGCGAGCAGCATTTGAGGCCATTGCTTCTTCAATTGAGGCTGCAAAATCAGAGATATTTATCTGTGGGTGGTGGCTGTGCCCCGAACTGTATCTACGGCGACCTTTCCACACTCATGCTTCGTCAAGGCTTGATAATTTGTTGGAAACAAAAGCTAAGCAAGGGGTTCAGATTTACATTCTTCTCTACAAAGAGGTGGCTCTTGCTTTGAAAATCAACAGTGTTTATAGCAAGAAAAAGCTTCTTAGCATTCATGAGAATGTGAGGGTATTACGCTATCCTGACCACTTTTCTACTGGTGTTTACCTGTGGTCGCATCATGAAAAGCTTGTCATTATTGATAACCATGTTTGCTTTATTGGAGGACTGGATTTATGTTTTGGTCGTTATGACACATCTGAGCATAAAGTGGGAGATTTCCCTCCTCAAATCTGGCCTGGAAAAGACTATTATAACCCAAGAGAATCTGAACCAAATTCATGGGAAGATACAATGAAAGATGAATTGGAACGTGAAAAATATCCTCGTATGCCTTGGCATGATGTTCATTGTGCCCTTTGGGGACCACCTTGCCGTGACATTGCTAGGCACTTTGTTCAGCGATGGAATTATGCCAAGAGGAACAAAGCTCCATATGAGCAAGCAATTCCATTACTTATGCCTCAGCATCATATGGTTATTCCACATTACTTGGGAAGAAGCAGAGAGATACAGATTGAAAGTAGGAACGTTAACAATCATAGAGTTCTCAAGAGAGAAGATTCATTTTCCTCATCTTCCCAAGACCAAGATATTCCTCTACTTTTGCCTCAGGAGTCTGATGGGTTGGATACTCATGAAGGAGACCAAAAATTGAATGGGGTAATCTCCTTTTCACATCACCTTGACAAGCCAAGAAGGATCAGCAGTTCTCTTCCATTCTCGTTCCGGAAGGCCAAAATTGTAGCAGTTGGTCCAGATACACCAATGAAGGGCTTTGTAGATGATCTAGATTCTGAGCATGATCATGAGAAAATGTCTCTGGATAGAGCGGCTTATTTTGATTTACAAAGTACTGATCCAGAATGGTGGGAAACGCAAGAACGGGGTGACCAAGGAGGTTTTGCTGAAGAATCAGGACAAGTTGGTCCTCTTGCTTCCTGCCGTTGCCAAGTTATTAGGAGTGTGAGTCAATGGTCCGCTGGAACAAGTCAAACCGAAGAGAGCATCCACAATGCCTATTGCTCTCTTATTGAGAAAGCTGAATACTGCATCTACATTGAGAATCAATTTTTTATCTCAGGTCTTTCTGGAGATGAGTTGATACGGAATCGTGTGTTAGAAGCTTTATATCGACGGATTATGCGAGCTTACAATGACAAAAAATCTTTCAGGGTTATAGTTGTCATACCTCTCCTGCCTGGCTTCCAGGGCGGTCTTGATGATAGTGGTGCAGCATCTGTGAGAGCCATAATGCATTGGCAGTATCGAACCATTTGCAGAGGGCAGAATTCTATCTTGCATAATCTTTATGAACTTCTTGGTTCTAAAATACATGACTACATATCTTTTTATGGCCTAAGGTCTTATGGTAGACTCTCTAATGGTGGCCATGTGGCAACCAGCCAGGTGTATGTTCACAGTAAAATCATGATTGTTGATGATTGTATTACTTTGATTGGATCTGCTAATATTAATGATAGGAGCTTACTTGGCTCCAGAGATTCTGAGATTGGTGTAGTTATAGAAGACAGAGAGTTTACTGGTTCTTATATGGATGGAAAGCCTTGGAAAGCAGGAAAGTTTTCCTTGACCCTCCGATTGTCATTATGGTCTGAACACTTGGGTCTCCCTACAGGAGAGGTCAATCAAATAATGGACCCAGTTATTGAATCTACTTACAGGGATATTTGGATGGCAACAGCGAAGACAAATACTACAATTTACCAGGATGTCTTTTCTTGCGTACCTAATGATCTGATACACACCAGACTTGCTTTCAGACAAAGTGTGGCTTTTTGGAAAGACAGAATTGGTCACACTACCATTGATTTAGGAATAGCCCCAGAAAAATTAGAATCCTATCATGATGGAGGCATTAAGAACACCGATCCCTTGGAGAGATTAGCATCAGTGAAGGGTCATCTCGTCTCTTTTCCCTTGGAGTTCATGTGTCAGGAAAGTCTAAGACCTGCTTTTAATGAAAGTGAATACTACGCTACTCAAGTTTTCCATTGA 3372 0.4353 MATEQLMSAGGPRYVQMKSSPPPSPPAAAAEEMSSVPSFRHSCAEANRIFEELPKASIVSVSRPDASDISPMQLSYTIQVQYKQFKWELTKKAHQVFILHFALKKRAFIEEIHEKQEQVKEWLQNLGIGDHTPMVQDDDEGDDDTVPLHTEETHESAKDRDVPSSAALPIIRPALGRQHSIADRAKRAMQGYLNHFLGNISIVNSREVCKFLEVSKLSFSPEYGPKLKEEYVMVKHLPKIQKDDDSRKCCLSDCFSCCNDNWQKVWAVLKPGFLALLADHFDTQPLDIIVFDVLPASDGNGDGRLSLASEMKERNPLRHSFKVTCGIRSIRIRVKSSSKVKDWVAAINDAGLRPPEGWCHPHRYGSFAPPRGLVEDGSQAQWFIDGRAAFEAIASSIEAAKSEIFICGWWLCPELYLRRPFHTHASSRLDNLLETKAKQGVQIYILLYKEVALALKINSVYSKKKLLSIHENVRVLRYPDHFSTGVYLWSHHEKLVIIDNHVCFIGGLDLCFGRYDTSEHKVGDFPPQIWPGKDYYNPRESEPNSWEDTMKDELEREKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPYEQAIPLLMPQHHMVIPHYLGRSREIQIESRNVNNHRVLKREDSFSSSSQDQDIPLLLPQESDGLDTHEGDQKLNGVISFSHHLDKPRRISSSLPFSFRKAKIVAVGPDTPMKGFVDDLDSEHDHEKMSLDRAAYFDLQSTDPEWWETQERGDQGGFAEESGQVGPLASCRCQVIRSVSQWSAGTSQTEESIHNAYCSLIEKAEYCIYIENQFFISGLSGDELIRNRVLEALYRRIMRAYNDKKSFRVIVVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSILHNLYELLGSKIHDYISFYGLRSYGRLSNGGHVATSQVYVHSKIMIVDDCITLIGSANINDRSLLGSRDSEIGVVIEDREFTGSYMDGKPWKAGKFSLTLRLSLWSEHLGLPTGEVNQIMDPVIESTYRDIWMATAKTNTTIYQDVFSCVPNDLIHTRLAFRQSVAFWKDRIGHTTIDLGIAPEKLESYHDGGIKNTDPLERLASVKGHLVSFPLEFMCQESLRPAFNESEYYATQVFH 1123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01353 1123 MobiDBLite consensus disorder prediction 135 162 - -
Pumo2g01353 1123 Coils Coil 105 125 - -
Pumo2g01353 1123 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 487 514 IPR001736 GO:0003824
Pumo2g01353 1123 CDD PH_PLD 203 350 - -
Pumo2g01353 1123 FunFam Phospholipase 754 974 - -
Pumo2g01353 1123 SMART pld_4 487 514 IPR001736 GO:0003824
Pumo2g01353 1123 SMART pld_4 920 947 IPR001736 GO:0003824
Pumo2g01353 1123 Gene3D Endonuclease Chain A 745 980 - -
Pumo2g01353 1123 SUPERFAMILY Phospholipase D/nuclease 338 607 - -
Pumo2g01353 1123 SUPERFAMILY PH domain-like 258 350 - -
Pumo2g01353 1123 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 920 947 IPR001736 GO:0003824
Pumo2g01353 1123 Gene3D - 255 352 IPR011993 -
Pumo2g01353 1123 Pfam PLD-like domain 793 968 IPR025202 -
Pumo2g01353 1123 CDD PLDc_vPLD1_2_yPLD_like_1 380 524 - -
Pumo2g01353 1123 MobiDBLite consensus disorder prediction 1 33 - -
Pumo2g01353 1123 PIRSF PLD_euk 27 625 IPR016555 GO:0004630|GO:0006654|GO:0048017
Pumo2g01353 1123 PIRSF PLD_euk 616 1123 IPR016555 GO:0004630|GO:0006654|GO:0048017
Pumo2g01353 1123 CDD PLDc_vPLD1_2_yPLD_like_2 780 964 - -
Pumo2g01353 1123 MobiDBLite consensus disorder prediction 147 161 - -
Pumo2g01353 1123 Pfam Phospholipase D Active site motif 487 514 IPR001736 GO:0003824
Pumo2g01353 1123 PANTHER PHOSPHOLIPASE D 176 1113 IPR015679 -
Pumo2g01353 1123 SUPERFAMILY Phospholipase D/nuclease 760 970 - -
Pumo2g01353 1123 SMART PH_update 226 354 IPR001849 -
Pumo2g01353 1123 Gene3D Endonuclease Chain A 374 610 - -
Pumo2g01353 1123 MobiDBLite consensus disorder prediction 635 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01353 Pumo-Chr2 19804277 19817265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01353 1 1004 Phospholipase D Gene Family (Wang group) AT3G16785 73.043 0.0 1406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01353 K01115 - gmx:100780514 2182.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01353 2 19804277 19817265 Pumo2g01353 2 19804277 19817265 ECH