Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01352 ATGTGTATAATCTGCAACTGTGATTGGAATGTAGCGGACATGGTTCTTTTTCCATCTCTTGTCAATGGATTGGCAAGAGCTGTGTCGTTGAAGAAAGACAAGAGTTGTAGAAAGGATGGTGGAAGGAAAGCCGTGGAAGCATTGGCAAAGGAAGCAAGGAAAAATGAACTTTTACTGACTTCATCTGGAATTGTTAAGTCTGCCAAGGCCAACAATGTTGCCTCTGTTTTCACTAAGAAGGGCCAGAAAGGATTCAATCAGGACAGCCTTATTGTTTGGGAGGAATTTGGTTGCCAAGAAGACATCATCTTTTGTGGAGTTTTTGATGGGCATGGCCCCTTGGGGACACTTGGTATCCAAAAGAGTCAGGAAACTACTACCTTCTTTTTTGCTGTGCAACTGGCAGGAAAATCTGGCTGCAACATCACTTGA 432 0.4329 MCIICNCDWNVADMVLFPSLVNGLARAVSLKKDKSCRKDGGRKAVEALAKEARKNELLLTSSGIVKSAKANNVASVFTKKGQKGFNQDSLIVWEEFGCQEDIIFCGVFDGHGPLGTLGIQKSQETTTFFFAVQLAGKSGCNIT 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01352 143 Gene3D - 61 127 IPR036457 -
Pumo2g01352 143 SUPERFAMILY PP2C-like 65 114 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01352 Pumo-Chr2 19801200 19802253 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01352 14 115 PP2C-type Phosphatase Gene Family AT3G05640 52.885 1.07e-33 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01352 - - gmx:100814087 168.703