Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01351 ATGGAAACAGACAGGAACCTCCATAGATTTGACATATGGAAGCAGTCCTACATAAACACTTGTGCTGCCATTGACCAAGATCTAAAGCAGCATGCTGGGATTGATTCCTATCAAAGTGGTACTACAGCTTTGACAATTATCAAACAGGATGAACATCTCATTATAGCAAATGTTGGTGACTCTAGGGCTGTCTTGGCAACCTCTTCAGAGGATGGCACCTTGACTCCTCTTCAACTTACCACAGACTTGAAGCCAAATTTACCAAAGGAGGCAGAGCGCATAATGCGATCTAAAGGGCGAGTATTTTGTTTGGAAGATGAACCAGGAGTGTACAGGGTTTGGATGCCAAATGGTATGGGATGTTATTTCCAACCAAGAAGCAGTGAAAATTGTTGGTTCAACGCCACATAA 411 0.4282 METDRNLHRFDIWKQSYINTCAAIDQDLKQHAGIDSYQSGTTALTIIKQDEHLIIANVGDSRAVLATSSEDGTLTPLQLTTDLKPNLPKEAERIMRSKGRVFCLEDEPGVYRVWMPNGMGCYFQPRSSENCWFNAT 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01351 136 Gene3D - 1 127 IPR036457 -
Pumo2g01351 136 CDD PP2Cc 13 102 IPR001932 -
Pumo2g01351 136 Pfam Protein phosphatase 2C 15 102 IPR001932 -
Pumo2g01351 136 SUPERFAMILY PP2C-like 9 108 IPR036457 -
Pumo2g01351 136 ProSiteProfiles PPM-type phosphatase domain profile. 1 136 IPR001932 -
Pumo2g01351 136 PANTHER PROTEIN PHOSPHATASE 10 114 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01351 Pumo-Chr2 19798767 19801186 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01351 3 118 PP2C-type Phosphatase Gene Family AT5G27930 62.931 2.62e-52 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01351 - - gmx:100817397 204.912