Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01350 ATGGCTATACTAGATCTTAGCTTGATGATGAACAGCATTATAGCAAATGTTGGTGACTCTAGGGCTGTCTTGGCAACCTCTTCAGAGGATGGCACCTTGACTCCTCTTCAACTTACCACAGACTTGAAGCCAAACTTACCAAAGGAGGCAGAGCGCATAATGCGATCTAAAGGGCGAGTATTTTGTGTGGAAGATGAACCAGGAGTGTACAGGGTTTGGATGCCAAATAGTAAGACCCCAGGACTAGCAATATCTAGAGCAATTGGTGAGTACTGTGTAAAGGATTTTGGACTAATCTCTTTGCCAGATGTGACACAAAGAAAACTTACCACCAGGGATGAATTTGTCATCTTGGCAACAGATGGGGTATGGGATGTTATTTCCAACCATGAAGCAGTGAAAATTGTTGGTTCAACGCCACATAAGGAAAAAGTAGCTCAAAGGCTGGTGAAATGCGCCATGCATGAATGGAAACGTAAAAGAAGAGGCATTGCTATTGATGATATATCAGCTATTTGCCTCTTCTTTCATTCTCATCCCTGTCATCAACTCCTCCCCACTAAAATTGTCCAATAA 576 0.4253 MAILDLSLMMNSIIANVGDSRAVLATSSEDGTLTPLQLTTDLKPNLPKEAERIMRSKGRVFCVEDEPGVYRVWMPNSKTPGLAISRAIGEYCVKDFGLISLPDVTQRKLTTRDEFVILATDGVWDVISNHEAVKIVGSTPHKEKVAQRLVKCAMHEWKRKRRGIAIDDISAICLFFHSHPCHQLLPTKIVQ 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01350 191 SUPERFAMILY PP2C-like 13 178 IPR036457 -
Pumo2g01350 191 Pfam Protein phosphatase 2C 2 154 IPR001932 -
Pumo2g01350 191 Gene3D - 3 178 IPR036457 -
Pumo2g01350 191 PANTHER PROTEIN PHOSPHATASE 12 174 IPR015655 GO:0004722|GO:0006470
Pumo2g01350 191 CDD PP2Cc 13 176 IPR001932 -
Pumo2g01350 191 ProSiteProfiles PPM-type phosphatase domain profile. 1 176 IPR001932 -
Pumo2g01350 191 SMART PP2C_4 2 174 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01350 Pumo-Chr2 19750355 19770056 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01350 14 177 PP2C-type Phosphatase Gene Family AT3G05640 66.463 4.33e-82 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01350 - - gmx:100814087 295.819