Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01348 ATGCCAAATGGTAAGACCCCAGGACTAGCAATATCTAGAGCATTTGGTGACTACTGTGTAAAGGATTTTGTACTAATCTCTTTGCCAGATGTGACACAAAGAAAACTTACCACCAGGGATGAATTTGTCATCTTGGCAACAGATGGGGTATGGGATGTTATTTCCAACCAAGAAGCAGTGAAAATTGTTGGTTCAACGCCACATAAGGAAAAAGCAGCTCAAAGGCTGGTGAAATGCGCCATGCATGAATGGAAACGTAAGAGAAGAGGCATTGCTATTGATGATATATCAGCTATTTGCCTCTTCTTTCACTCTCACCCTCTCATCAACAACTCACCACTAAAATTGTCCAATAAGAATGGTGGGTGA 369 0.4146 MPNGKTPGLAISRAFGDYCVKDFVLISLPDVTQRKLTTRDEFVILATDGVWDVISNQEAVKIVGSTPHKEKAAQRLVKCAMHEWKRKRRGIAIDDISAICLFFHSHPLINNSPLKLSNKNGG 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01348 122 ProSiteProfiles PPM-type phosphatase domain profile. 1 103 IPR001932 -
Pumo2g01348 122 Pfam Protein phosphatase 2C 9 81 IPR001932 -
Pumo2g01348 122 Gene3D - 1 105 IPR036457 -
Pumo2g01348 122 PANTHER PROTEIN PHOSPHATASE 8 101 IPR015655 GO:0004722|GO:0006470
Pumo2g01348 122 SUPERFAMILY PP2C-like 7 105 IPR036457 -
Pumo2g01348 122 CDD PP2Cc 7 103 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01348 Pumo-Chr2 19737269 19738136 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01348 2 104 PP2C-type Phosphatase Gene Family AT3G05640 67.961 3.23e-49 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01348 - - gmx:100814087 193.741