Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01343 ATGGGGAGAAGAATGGGACAAGAATCAGATTACAAAACCCAGTTGGTGTTGGAGGTTTGCTCCATTTCCACCCGTTCTGTTGTGTGTGTTCATAGACTTGTCTCAAACCATGCTAAGCCACCTTTCATAGATTGGTATTGCATCCTTGGAGTGGAAGAAAATGCAGGGGTAAACACCATTCGCAAGCAATACCATAAACTTGCCTTGCAACTTCATCCGGACAAGAATAAACACCCAAAGGCTGAAATTGCATTCAAGCTTGTCTCTGAGGCATATATATGTCTGTCTGATGCTGCAAAAAGGAAAGCTTTTGACTTAAAGAGACACAAGAATTTCTGCTTTGAGTGCAATAGAATCCCTTATACATCCAAACATGTCCCTGGCAATTCCAATGGTTCAACTTTCAAGACATGGAACATTATTAGGGACTCAAGATCTTACAAAGTTTGGAGAAATATTAGGGAGATGAGAGAAAGGCTGAAGGAGGAGGCTAAGGTGATAGAGAACTGTCTGCTGAAAAATTCAATGTCAAAGAAAGAATCTCCCCTCTACAATCCAGCTGACTATAGACATGGAAGCAGGTTCCAGCATAAAGTTGAGAGAGAAATTCCTGTTTTCAATCCAATGAAATACTTGTACCAAGGGTACCCTCATTTGAAGGGCCATGTTTACAAGAATTCTGAGCTAAGTACTAACACGTGTATGTACCGTACAATAACATCACTCTTTGTTATGGCAATCACAAAAATGCAGCAATGA 759 0.4045 MGRRMGQESDYKTQLVLEVCSISTRSVVCVHRLVSNHAKPPFIDWYCILGVEENAGVNTIRKQYHKLALQLHPDKNKHPKAEIAFKLVSEAYICLSDAAKRKAFDLKRHKNFCFECNRIPYTSKHVPGNSNGSTFKTWNIIRDSRSYKVWRNIREMRERLKEEAKVIENCLLKNSMSKKESPLYNPADYRHGSRFQHKVEREIPVFNPMKYLYQGYPHLKGHVYKNSELSTNTCMYRTITSLFVMAITKMQQ 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01343 252 ProSiteProfiles dnaJ domain profile. 44 108 IPR001623 -
Pumo2g01343 252 Pfam DnaJ domain 44 105 IPR001623 -
Pumo2g01343 252 SUPERFAMILY Chaperone J-domain 34 110 IPR036869 -
Pumo2g01343 252 PRINTS DnaJ domain signature 80 100 IPR001623 -
Pumo2g01343 252 PRINTS DnaJ domain signature 64 79 IPR001623 -
Pumo2g01343 252 PRINTS DnaJ domain signature 46 64 IPR001623 -
Pumo2g01343 252 SMART dnaj_3 43 100 IPR001623 -
Pumo2g01343 252 CDD DnaJ 44 97 IPR001623 -
Pumo2g01343 252 PANTHER BNAC03G44070D PROTEIN 24 232 - -
Pumo2g01343 252 Gene3D DnaJ domain 43 163 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01343 Pumo-Chr2 19584063 19585527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01343 44 105 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 45.455 2.62e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01343 - - gmx:100781104 426.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01343 2 19584063 19585527 Pumo2g01343 2 19584063 19585527 ECH
Pumo4g00399 4 5337721 5339191 Pumo2g01343 2 19584063 19585527 PCT