Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01320 ATGGGAGTTGAAAAAGAAGGGACGAAAAGTGGAGGAGGTTATGTTGGTGGTTTTTTCCAGTTGTTTGACTGGACCTCAAAATCCCGTAAGAAATTATTTGCAGCCAAGTCAGAACTACCAGAGCCTTTAAAACAGGGAAGAAAAGTCGACTACAATGTGGCAATGACACGGCCCTCCTATCTGGTTGATGAAGATGAAATTGGAGTAGGGGCAAGTGTTAGAGGAAGTTGTGATCATAGTTATGCTTCATCTGTTACTGATGATGAAGCATATGGAACAAGGGCCCCTAGTGTTGTTGCCAGGCTTATGGGATTAGATTCCTTGCCTCCTTCCAGTTTTTCTGATCCTTATGCTACCCCATATTTTGATACCCGGTCCCTTCAAGATGCTCAGTACTTCAATAAAAACCTTGGTCACCAGCATGACCATCAGACACCATATTCTGGAAAGCTGGTTGAAAAGGTTGAGGGCTCATCTAGGAAATTCATGGAGCCAAAGCCGCAAAAGGCCATTACTAGGCCAATTGAAAAGTTCCAAACTGAAGTTTTGCCTCCAAAATCAGCTAAATCAATTCCTGTTACACACCATAAACTTTTGTCCCCTATTAAGAGTCCCAGCTTTGTTCCAACCAATAATGCTGCTTATATAATGGAGGCTGCAGCAAGAATTATTGAGCCTGGATCCCAAGCTAGTAGTACCAAGGCTAAGACACCTCTGGTAGCGTCATCAACACCATTGAGAGTTAGAGAACTTAAAGATAAGGTGGAGGCTTCACAGAAAGGACCTTTAATTGGGCCATCCTCCATGACCTCTAGAATTCGAGATCTAAAAGAGAAAAGAGAAATTTCTCAAAGAATAAGCAGGCTTTCCGAATCTTCTCAAAGTCAAAGATCAGTTGAGTCAAATGCTGCGAAGTATCTAAAAGGACAATCTTTGAACAGAAGCTGGAATGGATCTGCGGATACATCCATCAAATCTCCTACACACGAGGAAGAACAATCTTCTTTGAAGAATAAGGGGAAGTCCATTTCACTTGCAATCCAAGCAAAAGTGAATGTTCAAAGAAGGGAAGGTTTGAGTGTGACTGGTGGAAGAAGTTTGATGACCCAGAAAGAGCATCCTGACATTAAATCCAACCAACCAATAAAGGGAAATGTACAGAAAAATTTGCATAAGAAATCTTCTGCTCAGAATTCATCTGGTGCTCTCAGGCAGAATAATCTGAAACAGAATCATTCAACTGACAAAGACAAATTACCATCAAAGCCATTGGTTACCAATTCACACAGTAGGAAAGTTCTGAGTGGGGATTCTCCTTATGGACGTCATAGAAGCTCTAGTAATAAATCCATTTCAAAATCTAAAGTTGGATCCAGAAAGTCAGCAATGGAGGTGACCGATAGTGAAAAGGAAGTCTTATATACTAGCACAAACAATTTTCCTAGAAAGAAAAGGTCTACAGACAAGGACTGGAATGACAGGGTTGTGGATAATTTGTTCATTGAAAAAACTCAGAAGCCTGTTAAGTCTAACCTAGTGAGTAATAAACAAAATAGTTGGGCTGAAGAAGTCAAAAAGAAAGACATGGATGTAGTTTCCTTCACATTTACCACACCATTAGCAAGGAGCAATCCAGGTTTTGAGACATCTGGACAAGCTGGCCAGAATACTAATGATCTTTCCTTGGATCAACGCATTAAAAGAGTGTTACTCGATGCAGACAATACGAATTCTCCAATAGGATACAATATAATTGGTGGTGATGCCTTAGGTATCCTTTTGGAACAGAAGTTGAGGGAATTAACAAATATGGAAACCACTTGTCATGACTCTTCTAAAGTGAGGCAACCTGCCATTACGGTGCCAATGTCAGATGATCAAGTAACTAGCTGTAATGTAGTTAATCTCAATCCGAGGTTGCAACAGAAAAAAGACCAAGGTGTGTTATTTTCAGACAAGTTAAGCACTAACTATGATTCAGACATCTCCTTCACTGGTCCTCCTGAATTATCATTGAAGCATAACCCATGGATTGATGAGATGGAATCACAGTTACTCAATTGCCGACACCCAAGTCCAATCTCTGTTCTTGAGCCTTCTTTTTCAATTGAAAGCTGTGAATCTTCATTTAGCACAGATATTACTAGTACAGAAGGAAGCAAGTTATGCTCATCTGTTCAAGGTCAAGAATTTCATGGTTTGAATTTTTCAAGGAAGTTCTATCCTTGTGAATCTGATACAGAGTTATCTGATTCAGCTTCTTCAACATCAGCTGGGAACACGATGAGGAAGCACACAAGTACATTTTCTGTCACGAGGTTTGGAAGGTCAAGCACATGGGAGTTGGACTATGTGAAAGATATACTGTGTAATGTTGAGTTGATGTATATAGACTTTTCCCTTGGCCAAGTTAGTGAGGTTATAAACTCTCATGTATTCAAACAGTTGGAAGGCCGCAAGGGAGGGTTTAAGCGTGATGACGAGTCTAGGATGAGAAGGAAAGTTACATTTGATTGTGTGAGTGAATGTTTGGACTTGAGATGCAGGCGTTATGTAGGGGGAGGATACAAAATGTGGACCAAAGGGTTTGAAATGGTGAAAAGAAAAGAATGGTTGGCAGAAGATGTGTACAAGGAGATCTCAGGTTGGAGAGGAATGGGAGATTCAATGGTAGATGAGCTTGTGGACAAGGACATGAGCAGCCAGTATGGAAGATGGCTAGATTATGAGGTTGATGCTTTTGAACTTGGATCAGAGGTTGTGGACCAAATATTTAATTCTTTGGTTGATGATGTTGTCACTGAATTCTTGCAATTGTAA 2820 0.4039 MGVEKEGTKSGGGYVGGFFQLFDWTSKSRKKLFAAKSELPEPLKQGRKVDYNVAMTRPSYLVDEDEIGVGASVRGSCDHSYASSVTDDEAYGTRAPSVVARLMGLDSLPPSSFSDPYATPYFDTRSLQDAQYFNKNLGHQHDHQTPYSGKLVEKVEGSSRKFMEPKPQKAITRPIEKFQTEVLPPKSAKSIPVTHHKLLSPIKSPSFVPTNNAAYIMEAAARIIEPGSQASSTKAKTPLVASSTPLRVRELKDKVEASQKGPLIGPSSMTSRIRDLKEKREISQRISRLSESSQSQRSVESNAAKYLKGQSLNRSWNGSADTSIKSPTHEEEQSSLKNKGKSISLAIQAKVNVQRREGLSVTGGRSLMTQKEHPDIKSNQPIKGNVQKNLHKKSSAQNSSGALRQNNLKQNHSTDKDKLPSKPLVTNSHSRKVLSGDSPYGRHRSSSNKSISKSKVGSRKSAMEVTDSEKEVLYTSTNNFPRKKRSTDKDWNDRVVDNLFIEKTQKPVKSNLVSNKQNSWAEEVKKKDMDVVSFTFTTPLARSNPGFETSGQAGQNTNDLSLDQRIKRVLLDADNTNSPIGYNIIGGDALGILLEQKLRELTNMETTCHDSSKVRQPAITVPMSDDQVTSCNVVNLNPRLQQKKDQGVLFSDKLSTNYDSDISFTGPPELSLKHNPWIDEMESQLLNCRHPSPISVLEPSFSIESCESSFSTDITSTEGSKLCSSVQGQEFHGLNFSRKFYPCESDTELSDSASSTSAGNTMRKHTSTFSVTRFGRSSTWELDYVKDILCNVELMYIDFSLGQVSEVINSHVFKQLEGRKGGFKRDDESRMRRKVTFDCVSECLDLRCRRYVGGGYKMWTKGFEMVKRKEWLAEDVYKEISGWRGMGDSMVDELVDKDMSSQYGRWLDYEVDAFELGSEVVDQIFNSLVDDVVTEFLQL 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01320 939 MobiDBLite consensus disorder prediction 420 459 - -
Pumo2g01320 939 MobiDBLite consensus disorder prediction 380 409 - -
Pumo2g01320 939 MobiDBLite consensus disorder prediction 272 286 - -
Pumo2g01320 939 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 2 935 - -
Pumo2g01320 939 MobiDBLite consensus disorder prediction 287 324 - -
Pumo2g01320 939 Pfam DUF761-associated sequence motif 83 114 IPR032795 -
Pumo2g01320 939 MobiDBLite consensus disorder prediction 252 339 - -
Pumo2g01320 939 Pfam Domain of unknown function (DUF4378) 781 931 IPR025486 -
Pumo2g01320 939 MobiDBLite consensus disorder prediction 356 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01320 Pumo-Chr2 19329570 19335138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01320 16 937 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 31.356 2.97e-94 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01320 - - gmx:102669513 1621.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01320 2 19329570 19335138 Pumo2g01320 2 19329570 19335138 ECH
Pumo4g00420 4 5581743 5586579 Pumo2g01320 2 19329570 19335138 PCT