Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01313 ATGAAGGACGATGGAGGGACCGAAAAAAGTACTGATAATTTACCTTCCATTATTGTTGTCGGTGATGCAATTGTTGGTTTTGTTCTGAGAGAAGAAGCTGTTGGGAGCAAAAATTGTTTTGTTGTGATGATGATGATGGCACACAACTTAACGGGGCAGCTTGTGGGTTCAGAGATACATGGGTTTCACACGTTGGAGGATTTGGATATTAGTAATACTATGGAGGAAGCAAAAAGCAGATGGCTTCGTCCCAATGAGATTCATGCCATACTCTGTAATCACAAATATTTCAAGATCAATGCCAAGCCAATGAATTTGCCCGAAAGTGGTACTATTGTACTATTTGACCGCAAGATGCTTAGGAACTTCAGAAAAGATGGGCACAATTGGAAAAAGAAAACTGATGGGAAAACTGTTAAAGAAGCCCATGAACACTTAAAAGTTGGCAATGAAGAAAGGATCCACGTATATTATGCACATGGCCAAGATAACCCAACCTTTGTTCGTAGATGTTATTGGTTGCTTGATAAGAGTCTGGAGCACATAGTCCTTGTTCATTATCGTGAAACACAAGAGTTACAATTGCAAGGTTCTCCTGTTACACCTGTAAATTCAAATTCAAGTTCTGTCTCTGATCCAGCCGCATCTTGGATTCCATCAGAAGACTTAGATTCTGGGGTGAACTGTTCTTACGCTGTTGATAAACAGAGCTTAATGACAATTTAA 726 0.3967 MKDDGGTEKSTDNLPSIIVVGDAIVGFVLREEAVGSKNCFVVMMMMAHNLTGQLVGSEIHGFHTLEDLDISNTMEEAKSRWLRPNEIHAILCNHKYFKINAKPMNLPESGTIVLFDRKMLRNFRKDGHNWKKKTDGKTVKEAHEHLKVGNEERIHVYYAHGQDNPTFVRRCYWLLDKSLEHIVLVHYRETQELQLQGSPVTPVNSNSSSVSDPAASWIPSEDLDSGVNCSYAVDKQSLMTI 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01313 241 SMART CG_1_2 74 191 IPR005559 GO:0003677
Pumo2g01313 241 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 69 230 - -
Pumo2g01313 241 ProSiteProfiles CG-1 DNA-binding domain profile. 70 196 IPR005559 GO:0003677
Pumo2g01313 241 Pfam CG-1 domain 76 189 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01313 Pumo-Chr2 19230571 19238052 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01313 46 238 CAMTA Transcription Factor Family AT4G16150 71.574 8.58e-87 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01313 K21596 - gmx:100776839 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01313 2 19230571 19238052 Pumo2g01313 2 19230571 19238052 ECH
Pumo4g00430 4 5797701 5806794 Pumo2g01313 2 19230571 19238052 PCT