Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01280 ATGGTCTCTCCACCACTCCAATTTGATGAACAATATCCAACCATGGTTCCACTATGTGACCCAACAAAGGGCAAGCCACACTCAATTACCCCTTTAGCCTCACTTGAGATCTTGAAGAGCTATTGCAAGGGCTTCAAGCTGTTTTGGAATGAAGGCAACACCATACTCTTTGATGAGGAAAAAACGATGTGGAACTTGCTAAGTCACTCTTGGCTTCTGCTGAGAAAGTTGGCCATCAATAGTTTAAACGATTTGCAAAAGGGTCAGTCATTTGATCCTGAAGTAGCAGCCAAGGAACTAAACCCCGCCATTGTTGCATTTTATGAAGAGCTTCCCTTTTGTAAAGTTGCACAGTTCACTACAGTTCAAGCTATAATAGAAGATGTAGCTGAAGCAAAGAGGATTCACATTATTGATCTTGAAATCAGAAAGGGGGGCCAGTGGACTATCCTAATGCAAGCCCTTGAGTCAAGACAAGAATGTCCAATTGAGCTTCTAAAGATAACCGCTATTGATGGTGGAACCACAAGACACATAGTTGAGGACATTGGTAAGAGACTATACGATTTTGCTCAAGGTTTGAACATACCCTTCTCTTTCAACATAGTTATGAGAAGATTTTTTGAGATTGATCCTGAGGAAACAATTGCTGTTTATTCTCCTTATCCTTATGCCCTTAGAACCAAGCTTCAGCAATCAGACCAGGTTGAAACCATCATGAGAGTGATTAGAATCATAAGTCCCAATATAATGGTGGTAGTTGAAATTGAGGCAAACCACATCTCTAAATCTTTTGTAAACCGTTTCATTGAGTCTATTTTCTTCTTCAGTGCATTCTTTGATTGTTTTGAGACTTGCATGAAAGGGGATGAGAAGAACCGAATGATTATAGAATCAATGTACTTCGGTCATGGAATCAGAAATATTGTGGCTGCAGATGGAGCAGATAGAAAGAATAGGAGTGTGAAGATTGACGTGTGGAGGGCCTTCTTCTCCCGCTTTGGAATGGAAGAGACAGAATTGAGCACTTTGTCTTTATACCAAGCGGAATTGGTGGCTAAAAGATTTCCTTGTGGAAAATTTTGCACATTTGAGAAGAATGGGCATTGCCTTCTTATTGGGTGGAAAGGAACACCAATTAACTCTGTTTCTGTCTGGAAATTCCTTTGA 1170 0.4034 MVSPPLQFDEQYPTMVPLCDPTKGKPHSITPLASLEILKSYCKGFKLFWNEGNTILFDEEKTMWNLLSHSWLLLRKLAINSLNDLQKGQSFDPEVAAKELNPAIVAFYEELPFCKVAQFTTVQAIIEDVAEAKRIHIIDLEIRKGGQWTILMQALESRQECPIELLKITAIDGGTTRHIVEDIGKRLYDFAQGLNIPFSFNIVMRRFFEIDPEETIAVYSPYPYALRTKLQQSDQVETIMRVIRIISPNIMVVVEIEANHISKSFVNRFIESIFFFSAFFDCFETCMKGDEKNRMIIESMYFGHGIRNIVAADGADRKNRSVKIDVWRAFFSRFGMEETELSTLSLYQAELVAKRFPCGKFCTFEKNGHCLLIGWKGTPINSVSVWKFL 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01280 389 ProSiteProfiles GRAS family profile. 1 387 IPR005202 -
Pumo2g01280 389 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 98 382 IPR005202 -
Pumo2g01280 389 Pfam GRAS domain family 99 387 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01280 Pumo-Chr2 18368136 18370763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01280 107 388 GRAS Transcription Factor Family AT3G03450 34.130 5.51e-49 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo2g01280 GRAS 9.4e-72 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01280 - - gmx:100798926 510.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01280 2 18368136 18370763 Pumo2g01280 2 18368136 18370763 ECH