Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01279 ATGGAGAACCAACAGGAATTGGTGGTAGTAGGAAAGGTATGTGAAATCTATGACAAAATCTCCAAACTAGGAGACCTCAACCCCTCAAACCATGTCAACAACCTCTTCACCCAACTAGTCACAATTTGCACCACCCCATGTCAAATGGATGTCACTAAGTTAAGCCAACAAGTTAGAGAAACCATAGCTAAGCTAATTAGGCTTTGTGGGAAAGCTGAGGGGCTTCTTGAGAACCACTACTCAACCCTCATAGGATCACGTGAGAACCCATTAAGCCACATGAAACTCTTCCCCTACTACTCCAATTACCTCAAACTGAGCCACTTGGAGTTCACCATGCTAACCACACACATCACACAAGTTCCTACCCAACTAGCCTTTGTGGGGTCAGGTCCCCTTCCTCTCACCTCAATCATGTTGGCCACCCATTACCTCAAACACACATGCTTCCACAACTACGACATGGATCCGTTGGCAAATGCCAAGGCTCATGAATTGGTCTCATCGGACCCTGACTTATCAAAGAGAATGTTCTTCCACACTAGTGACATTCTAAGTGTGTCACATGGCCTCAAGGACTATAACGTGGTGTTCTTGGCAGCACTTGTGGGAATGGACCATAAGGAGAAAGCAAGAGTCATCAATCACTTAGCCAAATTCATGGCCCCTGGCGCCATTTTATTGTTGAGGAGTGCACATGGTGCTAGAGCTTTTCTCTACCCCGTGGTTGATCCTTCTTCTGATCTCAAAGGTTTTGAAGTTCTCTCAGTTTTTCACCCCACTGATGAGGTTATTAATTCAGTTATTGTTGCACGCAAGCATTCGGTGATGAATCAAGGGGTTTATTCATCACCAGTGTTGGCTAGCAAATGTTCTGGAGTTGAAGGGTTTAATCCCTTCAACCATGGGAACGTTATTGAGGAGTTGACCGTTGACGACCAGGCTTGA 948 0.4546 MENQQELVVVGKVCEIYDKISKLGDLNPSNHVNNLFTQLVTICTTPCQMDVTKLSQQVRETIAKLIRLCGKAEGLLENHYSTLIGSRENPLSHMKLFPYYSNYLKLSHLEFTMLTTHITQVPTQLAFVGSGPLPLTSIMLATHYLKHTCFHNYDMDPLANAKAHELVSSDPDLSKRMFFHTSDILSVSHGLKDYNVVFLAALVGMDHKEKARVINHLAKFMAPGAILLLRSAHGARAFLYPVVDPSSDLKGFEVLSVFHPTDEVINSVIVARKHSVMNQGVYSSPVLASKCSGVEGFNPFNHGNVIEELTVDDQA 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01279 315 Pfam Nicotianamine synthase protein 3 276 IPR004298 GO:0030410|GO:0030418
Pumo2g01279 315 PANTHER NICOTIANAMINE SYNTHASE 3 3 279 IPR004298 GO:0030410|GO:0030418
Pumo2g01279 315 Gene3D Vaccinia Virus protein VP39 8 275 IPR029063 -
Pumo2g01279 315 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 278 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01279 Pumo-Chr2 18244610 18245557 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01279 5 294 Nicotianamine Synthase Gene Family AT1G56430 55.705 1.49e-115 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01279 K05953 - gmx:100814069 581.252