Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01267 ATGTCTCTTCTATTACAAAGACCACCTGGTCCCAAAGCTTATCCGGGGGATGTTTTTTATTTACATTTGCGTCTTTTGGAAAGGGCCGCTAAATTAAGTTCTCAGTTAGGCGAAGGAAGTATGACTGCTTTACCAATAGTTGAAACTCAATTGGGAGATGTTTCAGCTTATATTCCTACTAATTTAATTTCCATTACAGATGCCGAAATATTCTTATCCGTCGATATATTCAATGTTGTAATTAGACCTACTATTAATGTTGGTATTTCCGTTTCCAGAGTTGGATCAGCGGCTCAAATTAAAGCCATGAAACAAGTAGCTGGTAAATTAAAATTGGAATTAGCACAATTCGTAGAATTAGAAGCTTTTGCCCAATTCGCTTCTAATCTTGATAAAGCTACTCAAAATCAATTAGCAAGAGGTCAACACTTGCGCGAGTTGCTTAAACAATCCCAATTAGCTCCTCTTATCGTGGAAGAACAGATAATAACTATTTATACTGGAATGAATGGTTATCTTGATTCATTAGAAATTAGACAGGTAAGGAAATTTCTTGAGTTACGCGCTCACTTAAAGACGAATAAACCTCAATTCAAAGAAATCATATCTTCTACCAAGACATTCACTGGGGAAGCAGAAGCCCTTTTGAAGGAAGCTATTCAGGAACAGATGGAACTCTTTTTACTACAAGAACAGATGGAACTCTTTTTACTACAGGAACAGGTAGAAAAAAATTGA 738 0.3604 MSLLLQRPPGPKAYPGDVFYLHLRLLERAAKLSSQLGEGSMTALPIVETQLGDVSAYIPTNLISITDAEIFLSVDIFNVVIRPTINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFVELEAFAQFASNLDKATQNQLARGQHLRELLKQSQLAPLIVEEQIITIYTGMNGYLDSLEIRQVRKFLELRAHLKTNKPQFKEIISSTKTFTGEAEALLKEAIQEQMELFLLQEQMELFLLQEQVEKN 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01267 245 Gene3D - 1 99 IPR027417 -
Pumo2g01267 245 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 1 227 IPR005294 GO:0015986|GO:0045261|GO:0046933
Pumo2g01267 245 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 100 227 - -
Pumo2g01267 245 FunFam ATP synthase subunit alpha 100 229 - -
Pumo2g01267 245 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 1 92 IPR000194 GO:0005524
Pumo2g01267 245 Gene3D - 100 227 IPR038376 -
Pumo2g01267 245 Pfam ATP synthase alpha/beta chain, C terminal domain 99 222 IPR000793 GO:0015986
Pumo2g01267 245 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 98 IPR027417 -
Pumo2g01267 245 CDD ATP-synt_F1_alpha_C 103 227 IPR000793 GO:0015986
Pumo2g01267 245 FunFam ATP synthase subunit alpha, mitochondrial 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01267 Pumo-Chr2 17815193 17815930 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01267 9 105 Primary Pumps ATPases(2) AT4G38510 29.897 7.24e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01267 K02111 - gmx:121173224 383.645