Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01262 ATGAAGCCCCTCCGTCACCGTCTTCCTCTTGGCAACATCAATCAGAATGTTATGGCTAAAAACATCCCTGCTCATGCCAACAAACTAGATCTTTCCCGGTTCTTGGAGCGTCAGGCAGTGATCAGAAAGAAACTTCAGTTAGTTGGTGTAACAGCTATGCTAATAGCTTGTAAGTACGAGGAGGTCTCAGTCCCTACCGTTGAGGATTTTATTCTGATAACAGACAAGGCATATACAAGAAATGAAGTTTTAGATATGGAGAAATTAATGATGAACATCTTGCAATTCAAGTTGTCTGTGCCTACTCCATACATGTTCATGAGAAGATTTCTTAAGGCAGCTCATTCTGATAAAAAGCTGGAGCTCTTGTCCTTCTTCTTGATCGAGCTTTGCTTGGTGGAGTGCAAAATGCTGAAGTTTCCACCATCTTTGCTAGCTGCTGCAGCCATATACACAGCTCAATGTAGTCTGTACCAGTTTAAGCAATGGACTAAGACCAGCGAGTGGTATACTGATTACTCAGAAGAGCAGCCTCTAGAATGCTCTAGGCTGTTAGTTACTTTCCATCAGAAAGCTGGATCAGGGAAACTCACTGGTGGTGTTAATATGGCTGCAAGGAGGCTTGCTATGAATGTCATACAGCAATGTGTAGGAAAACTTGAACCCATCATCAAACAATTTTTGCTATCATTAATGTCTGGAGATAGCAAGCCGGTGAACAGTCAAGTCGAATACCATGGTATTATCTATGATCTGTATTGCTGTGCTTGTCAGATCCTGTCTGGAGTTCTCGTTTATGTGACTCGAGAGCTACTGTGCACCCAGTCCATTAATCCTGAATATGACAATTCTTCTTCATCTGTTCTTCCAAATTGTGACTCACGAGATTTGAAGGATACTCAGTGCCAAGCCTATCCCAGTGGTGACATGTCTATATCAACTAAATCTGAGCTTACTGAAGTTAAAGCAGAAGTTCTGGTGCATTCAATTCATGAAAATCTTGGCGAGACAAAAATGGACGAGGATAGTGCACATGATAAAAGGCCCACTGAAAGTGGACAAGAAAAGCAAGAAAATGTGACCCAGCCATCTGAACATGGAGCTGGAACCAAGTCTGGTAAGCCAAAAATAAAGGGGGTCTCATTGACTGAGCTGTATACTCCTGAGCAAGTCAGGGAACATATCACTGACCTCAGGCGATGGATTGGCCAAAGCAAATCAAAAGCAGAGAAGAACCAAGCAATGGAGCATTCAATGAGTGAGAACTCATGTCAATTGTGTGCAGTGTGCTGTAGAGAAACTAACGTTTGA 1311 0.4249 MKPLRHRLPLGNINQNVMAKNIPAHANKLDLSRFLERQAVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYTRNEVLDMEKLMMNILQFKLSVPTPYMFMRRFLKAAHSDKKLELLSFFLIELCLVECKMLKFPPSLLAAAAIYTAQCSLYQFKQWTKTSEWYTDYSEEQPLECSRLLVTFHQKAGSGKLTGGVNMAARRLAMNVIQQCVGKLEPIIKQFLLSLMSGDSKPVNSQVEYHGIIYDLYCCACQILSGVLVYVTRELLCTQSINPEYDNSSSSVLPNCDSRDLKDTQCQAYPSGDMSISTKSELTEVKAEVLVHSIHENLGETKMDEDSAHDKRPTESGQEKQENVTQPSEHGAGTKSGKPKIKGVSLTELYTPEQVREHITDLRRWIGQSKSKAEKNQAMEHSMSENSCQLCAVCCRETNV 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01262 436 SMART cyclin_7 6 92 IPR013763 -
Pumo2g01262 436 SMART cyclin_7 105 187 IPR013763 -
Pumo2g01262 436 MobiDBLite consensus disorder prediction 332 354 - -
Pumo2g01262 436 Pfam Cyclin, N-terminal domain 31 99 IPR006671 -
Pumo2g01262 436 MobiDBLite consensus disorder prediction 332 381 - -
Pumo2g01262 436 PANTHER CYCLINS 31 191 IPR039361 -
Pumo2g01262 436 Gene3D - 100 193 - -
Pumo2g01262 436 Pfam Sister chromatid cohesion protein PDS5 protein 200 274 - -
Pumo2g01262 436 SMART Cyclin_C_2 101 223 IPR004367 -
Pumo2g01262 436 SUPERFAMILY Cyclin-like 31 98 IPR036915 -
Pumo2g01262 436 SUPERFAMILY Cyclin-like 100 198 IPR036915 -
Pumo2g01262 436 Pfam Cyclin, C-terminal domain 101 198 IPR004367 -
Pumo2g01262 436 Gene3D - 33 99 - -
Pumo2g01262 436 FunFam G2/mitotic-specific cyclin-1 89 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01262 Pumo-Chr2 17755607 17759480 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01262 31 199 Core Cell Cycle Gene Families AT1G20610 68.639 1.38e-79 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01262 K21777 - gmx:100812029 325.479