Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01240 ATGGCTCTGATCCTGCACGCAACCAAAACAAACAAAAATGCTTTTAAGACTCTGATCGCGGCAGAGTACACTGGCGTCCAAGTGGAATTGGCCCCTAATTTCGAGATGGGCGTCTCTAATAAAACTCCTGAATTCCTGAAGATGAATCCTATTGGAAAGGTTCCTGTCTTGGAAACGCCCGATGGTCCAGTCTTTGAGAGCAATGCCATTGCTCGTTACGTTGCTCGACTCAAGGGTGACAACACTTTGTTCTCATCTTCTGCCATTGATAATGCCCACATTGACCAGTGGATTGATTTTTCATCCTTGGAGATTGATGCTAATATTATGAAATTGTACCTACCAAGACTTGGATTTGCCCCATACCTTCCTCCAGTTGAGGAGGCTGCAAATTCTGCGTTGAAGAGATCATTCGGGGCCCTGAACACTCATCTTGCCTCCAATACTTACCTGGTTGGCCATTCCGTTACCCTTGCTGACATCATAACGACATGCAACTTGTATTTAGGATTCAGCCAGCTCTTAGTTAAGAGCTTCACCTCGGAGTTCCCTCATGTCGAGAGATACTTTTGGACCTTGGTCAACCAGCCTAACTTCCGAAAGATATTAGGTCAGGTTAAGCAAACTGAGGCTGTTCCACCTATTCCATCCGCAAAGAAGCCTTCACAGCCTAAGGAATCTAAGCCCAAGCCTAAGGATGAACCAAAGAAAGTGGCTAAACCAGAGCCCAAAGAAGAAGCAGAGGAGGAGGCACCCAAGCCCAAGCCCAAGAATCCTCTTGATCTTCTTCCTCCAAGCAAGATGATATTGGATGAATGGAAAAGACTCTACTCAAACACCAAGACCAACTTCAGGGAGGTTGCAATCAAAGGGTTTTGGGACATGTACGATCCAGAGGGATATTCTCTGTGGTTCTGTGATTACAAATACAATGATGAGAACACTGTTTCCTTTGTTACATTGAACAAGGTTGGTGGATTTCTTCAGCGGATGGATCTGGCTCGCAAGTATGCATTTGGAAAGATGCTGGTGATTGGATCACAGGCACCATTTAAGGTGAAGGGGTTGTGGCTTTTCCGCGGACAAGAGATCCCACAGTTTGTGATTGATGAATGCTATGATATGGAGCTCTACGACTGGACCAAAGTTGACATCTCTGACGAAACTCAGAAAGAGCGCGTCAATCAGATGATTGAGGATTATGAACCATTTGAGGGAGAGTCTCTTTTGGATGCCAAGTGCTTTAAGTGA 1251 0.4532 MALILHATKTNKNAFKTLIAAEYTGVQVELAPNFEMGVSNKTPEFLKMNPIGKVPVLETPDGPVFESNAIARYVARLKGDNTLFSSSAIDNAHIDQWIDFSSLEIDANIMKLYLPRLGFAPYLPPVEEAANSALKRSFGALNTHLASNTYLVGHSVTLADIITTCNLYLGFSQLLVKSFTSEFPHVERYFWTLVNQPNFRKILGQVKQTEAVPPIPSAKKPSQPKESKPKPKDEPKKVAKPEPKEEAEEEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSQAPFKVKGLWLFRGQEIPQFVIDECYDMELYDWTKVDISDETQKERVNQMIEDYEPFEGESLLDAKCFK 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01240 416 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Pumo2g01240 416 MobiDBLite consensus disorder prediction 210 263 - -
Pumo2g01240 416 CDD GST_N_EF1Bgamma 5 77 - -
Pumo2g01240 416 Gene3D Glutaredoxin 1 74 - -
Pumo2g01240 416 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Pumo2g01240 416 SUPERFAMILY GST C-terminal domain-like 73 213 IPR036282 -
Pumo2g01240 416 CDD GST_C_EF1Bgamma_like 90 210 - -
Pumo2g01240 416 Pfam Glutathione S-transferase, C-terminal domain 127 197 IPR004046 -
Pumo2g01240 416 SMART EF1G_2 255 363 IPR001662 GO:0003746|GO:0006414
Pumo2g01240 416 FunFam Elongation factor 1-gamma 1 256 416 - -
Pumo2g01240 416 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 215 IPR010987 -
Pumo2g01240 416 FunFam Elongation factor 1B gamma 1 74 - -
Pumo2g01240 416 Pfam Elongation factor 1 gamma, conserved domain 255 363 IPR001662 GO:0003746|GO:0006414
Pumo2g01240 416 SFLD Main (cytGST) 5 190 - -
Pumo2g01240 416 Gene3D - 80 213 - -
Pumo2g01240 416 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 416 IPR044628 GO:0004364
Pumo2g01240 416 MobiDBLite consensus disorder prediction 223 256 - -
Pumo2g01240 416 SUPERFAMILY eEF1-gamma domain 256 416 IPR036433 GO:0003746|GO:0006414
Pumo2g01240 416 FunFam Elongation factor 1 gamma 80 215 - -
Pumo2g01240 416 SFLD Glutathione Transferase (cytosolic) 5 190 IPR040079 -
Pumo2g01240 416 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 256 416 IPR036433 GO:0003746|GO:0006414
Pumo2g01240 416 SUPERFAMILY Thioredoxin-like 2 83 IPR036249 -
Pumo2g01240 416 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 256 416 IPR001662 GO:0003746|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01240 Pumo-Chr2 17542054 17543940 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01240 1 416 Eukaryotic Initiation Factors Gene Family AT1G57720 75.359 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01240 K03233 - gmx:100795680 732.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01240 2 17542054 17543940 Pumo2g01240 2 17542054 17543940 ECH