Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01232 ATGGGGGACGAGTCGCCCAAAAATAAAGTGAAGTTCCTGTGCAGCTACGGTGGGAAGGTCCTTCCACGACCCTCCGATGGCCTCCTCAGGTACGTCGGCGGCGAGACTCGTGTCGTTTCCGTCCCTCGTGACATAACTTTCCCCGAGATAATGAAGAAGGTGAGTAGCATGGTGGAGGGGGATATGGTCCTAAAGTACCAACTGGTCCCGGAAGATCTGGACGCATTGGTGTCGGTGAGAACAGAGGAAGATGTGAAGCACATGATTGAGGAGCACGATCGCCACCAAACTGGGTTGCTCCGTGCATTCCTCTTTCCCCCTTCCAAGGCAGGTTTGGTTGCGTGCGAACCGTATCTGTTGGAGCAACGTTACATCGACGCCATAAATGGGATAATCCGGACAAGCCCCAGGGCAACCAAGGGGTCTGCCTGTTCTTCCCCAAAGTCAAGCTCCCCAGATGCTACGGATCAGTACTCCCCTAGGTTTGCAAATGTAAATCCAATGCACAGAGTGCAGAGCTCTCCCAGCCTGACCAACCTCACTGGACTGGATCACCTAGGTCCAGCTCATCAACATCAACATCATCATCATCATCCTTTTCATAATTACCCATCATCTACCTCTAGACCGCCACAAGATCCTCAAATGGGAATTAGGCTTGGTGGAGGAAGGTTTAATTATCATTACTCTAACACCAGACAATCACCCCACAGAGGAGGAGGAGGAGCAAGTTACGCCTACTATGATGACTCTGCAGCCTATGCCCATCTTCCCACTGATAGAATTCATAGTGTGTCTAGGAGTCCTAGAAGAAAGTCTATATGGGAATAG 831 0.5078 MGDESPKNKVKFLCSYGGKVLPRPSDGLLRYVGGETRVVSVPRDITFPEIMKKVSSMVEGDMVLKYQLVPEDLDALVSVRTEEDVKHMIEEHDRHQTGLLRAFLFPPSKAGLVACEPYLLEQRYIDAINGIIRTSPRATKGSACSSPKSSSPDATDQYSPRFANVNPMHRVQSSPSLTNLTGLDHLGPAHQHQHHHHHPFHNYPSSTSRPPQDPQMGIRLGGGRFNYHYSNTRQSPHRGGGGASYAYYDDSAAYAHLPTDRIHSVSRSPRRKSIWE 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01232 276 MobiDBLite consensus disorder prediction 137 181 - -
Pumo2g01232 276 Gene3D - 30 105 - -
Pumo2g01232 276 PANTHER OS05G0427100 PROTEIN-RELATED 3 217 - -
Pumo2g01232 276 MobiDBLite consensus disorder prediction 137 215 - -
Pumo2g01232 276 SUPERFAMILY CAD & PB1 domains 25 110 - -
Pumo2g01232 276 SMART PB1_new 24 107 IPR000270 GO:0005515
Pumo2g01232 276 Pfam PB1 domain 29 106 IPR000270 GO:0005515
Pumo2g01232 276 CDD PB1_UP2 13 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01232 Pumo-Chr2 17483418 17484807 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01232 3 156 MAP Kinase Kinase Kinase AT3G46920 41.317 2.65e-34 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01232 - - gmx:100800353 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01232 2 17483418 17484807 Pumo2g01232 2 17483418 17484807 ECH