Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01192 ATGGAGGGGAACTTCAGTTCATACAATCCTCAACTAGCCTCTAGCTTGAAGAAGAGTTCCAGTAAGCAAGAACATGATCATTCAGTGAAGCATAATCATCTCAATGAAGAAGATTATATGTCTCCTTCTTTCAATCTGCGGAATATTTCAAAGCTCATTCTTCCCCCACTGGGTGTTTCAAGCCAGAATCCAGTTAACTCAAAAGGATGGATCATATCACCAATGGATTCCAGATACAGGTGTTGGGAGAGTTTTATGGTTCTTCTGGTAGCTTATTCTGCATGGGTGTATCCCTTTGAAGTTGCTTTCATGCACAAGTCTTCTAATAAGAAAATCTATATTGTGGACACTGTTGTTGATCTTTTCTTCGGTATTGATATTGTTTTGACATTCTTCCTGGCTTACATTGATCGAACAACTCATCTACTAGTTCGAGACAAGAAGAAGATTGTAGTGAGATACTTGTCTACATGGTTCGTGATGGATTTGGCATCAACTATACCATATGAGGCAATTGGATATTTGTTCACTGGCAAACAGAAAGTGGGTCTCCCATACTTCCTCTTGGGCCTGCTCAGATTTTGGAGAATCAGACGGGTCAAGCAATACTTCACAAGGCTTGAGAAAGACATCAGGTTCAGCTATTTCTGGGTCCGATGTGCTAGGCTTCTTTCTGTAACACTTTTTTCAATTCATTGTGCTGGGTGTCTCTATTACATGCTAGCTGATCGTTACCCCCACCAAGGAAAGACATGGATTGGAGCTGTGAACCCAAACTTCCGAGAGACAAGCCTTCGGATCAGATACATTTCGGCCATGTACTGGTCCATCACTACCATGACCACTGTAGGTTATGGTGACCTTCATGCTGTCAACACCATGGAAATGATCTTCATTATTTTCTACATGCTCTTTAACCTTGGCCTAACTGCTTACTTGATTGGTAACATGACAAATCTTGTTGTTGAAGGAACTCGCCGTACCATGGAATTTAGAAATAGCATTGAAGCAGCATCAAACTTCGTGTGCCGAAACCGGTTGCCTCCAAGGTTAAAAGAGCAGATCTTGGCTTACATGTGCTTAAGATTTAAGGCAGAGAGCTTGAATCAGCATCAGCTTATTGAACAGCTTCCGAAGTCGATTTGCAAAGGCATCTGCCAGCATTTGTTTTTTGCAACTGTAGAGAAAGTCTATCTTTTCAAAGGCATCTCAAAAGAAATTATTTTGTCCCTGGTTGCAAAAATGAAGGCAGAATACATACCACCTAGAGAGGATGTTATCATGCAAAATGAAGCACCAGATGATGTTTACATTATAGTCTCTGGCGAAGTGGAAATCATCGAGAATGAAATGGAGAAAGAAAAAATTTTAGGGACTCTACATACTGGGGACATGTTTGGAGAGGTTGGTGCACTTTGTTGTAGACCTCAGACCTTTACCTACAGAACCAAGACTCTCACACAGCTCCTGAGACTGAAGACCAATACTCTTCTAGAAGCAATGCAGATTAAAAGAGAAGACAACATGTGTATACTCAAAAATTTTCTTCAGCATTTCAAGCAGCTTAAGGATCTGAGTATCAAAGATTTGATGGTGGAGAATGTGGAAGAAGAGGACCCTAACATGGCTGTGAACTTGTTAACTGTGGCAAGCACTGGCAATGCTGCTTTTCTTGAGGAGCTTCTAAGAGCAGGTTTGGATTCTGACATTGGAGACTCCAAAGGGAAAACTCCATTGCACATAGCAGCATCAAATGGGCATGAAGAGTGTGTTAAAGTCTTACTCAAGCATACATGCAGCATACATATAAGAGACATGAATGGTAACACTGCATTATGGGATGCTATAGCATCAAAACATTACTCCATATTCCGGATCCTCTTCCAGCTTGCTGCTCTCTCTGATCCAAACACAGCAGGCGATCTCCTGTGTACAGCAGCAAAAAGAAATGAATTAACAGTGATGACCGATCTTTTAAAGCAAGGATTAAACATTGACTCTAAAAATCACCATGATACAACAGCAATCCAAATTGCCATGGCAGAAAATCATGTGGACATGGTTCAGTTGCTTGTGATGAATGGTGCAGATGTCTCTGATGTGCATAATCATGAATTTTGTTCATCCACCTTAAATGAAATGCTGCAGAAGCGTGAAATTGGGCATCTAATTAATGTAACTGAGGTCATGCCCGGTGAAGTTGTATTAAAGGGGAGACATCAAGAGCAGGAGCACAATGGGGGAAGATCTAATGGACTGAAGTTTCCAAGAGTAAGCATATATAGAGGTCACCCTGTAGTAAGAAGAGAAAAATGTTCTATGGAAGCTGGGAAGCTAATAAGGTTGCCTGATTCATTAGAGGAGCTCAAAACTATTGCAGGTGAAAAATTTGGGTTTGATGCAAAAGATGCAACGGTGACAAATGAAGATGGAGCGGAAATAGACTCTATTGATGTGATCAGAGATAATGACAAACTTTTTTTTTGTTGA 2490 0.4076 MEGNFSSYNPQLASSLKKSSSKQEHDHSVKHNHLNEEDYMSPSFNLRNISKLILPPLGVSSQNPVNSKGWIISPMDSRYRCWESFMVLLVAYSAWVYPFEVAFMHKSSNKKIYIVDTVVDLFFGIDIVLTFFLAYIDRTTHLLVRDKKKIVVRYLSTWFVMDLASTIPYEAIGYLFTGKQKVGLPYFLLGLLRFWRIRRVKQYFTRLEKDIRFSYFWVRCARLLSVTLFSIHCAGCLYYMLADRYPHQGKTWIGAVNPNFRETSLRIRYISAMYWSITTMTTVGYGDLHAVNTMEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVCRNRLPPRLKEQILAYMCLRFKAESLNQHQLIEQLPKSICKGICQHLFFATVEKVYLFKGISKEIILSLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEIIENEMEKEKILGTLHTGDMFGEVGALCCRPQTFTYRTKTLTQLLRLKTNTLLEAMQIKREDNMCILKNFLQHFKQLKDLSIKDLMVENVEEEDPNMAVNLLTVASTGNAAFLEELLRAGLDSDIGDSKGKTPLHIAASNGHEECVKVLLKHTCSIHIRDMNGNTALWDAIASKHYSIFRILFQLAALSDPNTAGDLLCTAAKRNELTVMTDLLKQGLNIDSKNHHDTTAIQIAMAENHVDMVQLLVMNGADVSDVHNHEFCSSTLNEMLQKREIGHLINVTEVMPGEVVLKGRHQEQEHNGGRSNGLKFPRVSIYRGHPVVRREKCSMEAGKLIRLPDSLEELKTIAGEKFGFDAKDATVTNEDGAEIDSIDVIRDNDKLFFC 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01192 829 Gene3D Jelly Rolls 366 541 IPR014710 -
Pumo2g01192 829 SMART cnmp_10 399 516 IPR000595 -
Pumo2g01192 829 CDD CAP_ED 399 512 IPR000595 -
Pumo2g01192 829 ProSiteProfiles KHA domain profile. 757 829 IPR021789 -
Pumo2g01192 829 MobiDBLite consensus disorder prediction 1 29 - -
Pumo2g01192 829 ProSiteProfiles Ankyrin repeat profile. 671 703 IPR002110 GO:0005515
Pumo2g01192 829 FunFam Potassium channel KAT3 81 323 - -
Pumo2g01192 829 PANTHER POTASSIUM CHANNEL AKT1 45 828 IPR045319 GO:0005249|GO:0006813
Pumo2g01192 829 FunFam Potassium channel KAT2 387 523 - -
Pumo2g01192 829 Pfam KHA, dimerisation domain of potassium ion channel 756 828 IPR021789 -
Pumo2g01192 829 ProSiteProfiles Ankyrin repeat profile. 574 606 IPR002110 GO:0005515
Pumo2g01192 829 ProSiteProfiles Ankyrin repeat region circular profile. 671 699 - -
Pumo2g01192 829 PRINTS EAG/ELK/ERG potassium channel family signature 269 286 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pumo2g01192 829 PRINTS EAG/ELK/ERG potassium channel family signature 116 126 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pumo2g01192 829 PRINTS EAG/ELK/ERG potassium channel family signature 295 306 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pumo2g01192 829 PRINTS EAG/ELK/ERG potassium channel family signature 127 136 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pumo2g01192 829 PRINTS EAG/ELK/ERG potassium channel family signature 313 322 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pumo2g01192 829 Pfam Cyclic nucleotide-binding domain 419 502 IPR000595 -
Pumo2g01192 829 ProSiteProfiles Ankyrin repeat region circular profile. 574 605 - -
Pumo2g01192 829 MobiDBLite consensus disorder prediction 1 18 - -
Pumo2g01192 829 Gene3D - 80 322 - -
Pumo2g01192 829 Pfam Ankyrin repeats (3 copies) 550 630 IPR002110 GO:0005515
Pumo2g01192 829 SUPERFAMILY Ankyrin repeat 535 704 IPR036770 -
Pumo2g01192 829 Gene3D - 543 722 IPR036770 -
Pumo2g01192 829 Pfam Ion transport protein 80 328 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pumo2g01192 829 ProSiteProfiles cAMP/cGMP binding motif profile. 399 518 IPR000595 -
Pumo2g01192 829 SUPERFAMILY cAMP-binding domain-like 326 518 IPR018490 -
Pumo2g01192 829 PRINTS Ankyrin repeat signature 575 590 IPR002110 GO:0005515
Pumo2g01192 829 PRINTS Ankyrin repeat signature 687 701 IPR002110 GO:0005515
Pumo2g01192 829 SMART ANK_2a 574 603 IPR002110 GO:0005515
Pumo2g01192 829 SMART ANK_2a 607 638 IPR002110 GO:0005515
Pumo2g01192 829 SMART ANK_2a 541 570 IPR002110 GO:0005515
Pumo2g01192 829 SMART ANK_2a 671 700 IPR002110 GO:0005515
Pumo2g01192 829 SUPERFAMILY Voltage-gated potassium channels 74 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01192 Pumo-Chr2 17124136 17130206 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01192 1 579 Ion Channels AT4G22200 70.598 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01192 K21867 - gmx:100798422 1551.95