Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01154 ATGCCAAAGTCGAAGAGAAATAGACAAGTTACGCTTTCAAAGACGAAGAAAAAGGGAAGAGATCATAAAGAGACGATAGTGAACGGAATAAAAGAGGCTGCAGAAAAGTACGGGCATGCGTACGTGTTCTCGTTCGAGAACATGAGGAATCAGAAATTCAAGGAGTTCAGGGAACAGTTGAAATCGAATAGCAGGTTCTTTCTCGGCTCTAACAAAGTAATGCAAGTTGCTTTGGGTCGCTCCGCTGCAGATGAGATTAGACCCGGCCTTCATAAGGTTTCAAAGCTATTGCGTGGAGATGCTGGGATGTGTTTTACCAATTTGTCTAAGGAAGAAGTTGAAAGGCTGTTTAAAGAATTTGAGGAATATGACTTTGCAAGAACAGGAAGCATTGCCACTGAAAATGTGGATCTCAAGGAGGGTCCTTTAGAGCAATTCACACATGAGATGGAACCTTTTCTCAGGAAGCAAGGCATGCCGGTTCGGTTAAATAAAGGTGTTGTGGAGCTTGTTTCGGATTTTGTTGTTTGTGAGGAAGGGAAGCCCTTGTCACCTGAGGCTGCTCGTATACTGCGTTTAATGGGAATCAAGATGGCAACATTTCGACTTCACCTAATTTGCAGGTGGAGTCCCGATGAGTTTGAACTTTACATTGATGGGCCAGATGAATCCGATATTGAATGCTCGTAG 690 0.4348 MPKSKRNRQVTLSKTKKKGRDHKETIVNGIKEAAEKYGHAYVFSFENMRNQKFKEFREQLKSNSRFFLGSNKVMQVALGRSAADEIRPGLHKVSKLLRGDAGMCFTNLSKEEVERLFKEFEEYDFARTGSIATENVDLKEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPEAARILRLMGIKMATFRLHLICRWSPDEFELYIDGPDESDIECS 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01154 229 MobiDBLite consensus disorder prediction 1 22 - -
Pumo2g01154 229 SUPERFAMILY Ribosomal protein L10-like 20 144 IPR043141 -
Pumo2g01154 229 Pfam Insertion domain in 60S ribosomal protein L10P 126 196 IPR040637 -
Pumo2g01154 229 Gene3D - 125 198 IPR043164 -
Pumo2g01154 229 MobiDBLite consensus disorder prediction 1 16 - -
Pumo2g01154 229 FunFam Ribosome assembly factor mrt4 29 132 - -
Pumo2g01154 229 CDD Ribosomal_P0_like 21 184 IPR033867 GO:0000027
Pumo2g01154 229 FunFam Ribosome assembly factor mrt4 125 198 - -
Pumo2g01154 229 Pfam Ribosomal protein L10 19 120 IPR001790 -
Pumo2g01154 229 Gene3D - 30 211 IPR043141 -
Pumo2g01154 229 PANTHER MRNA TURNOVER PROTEIN 4 MRTO4 1 220 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01154 35 203 Cytoplasmic Ribosomal Protein Gene Family AT3G11250 21.387 2.96e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01154 K14815 - gmx:100305462 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01154 2 16743774 16746308 Pumo2g01154 2 16743774 16746308 ECH