Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01143 ATGGCATCGTCCAAGGTAGCGATGACGACGACGACGACGAATTCGGATATTTCGAGCCAGCAGCAGCAGCAGGTATGGGATGAGTCTCAAGACAACAATATGAGCATCAGCCTCCACGATTTGTTGACCTCTGTTAGCAGAAACGACGCCGTGCTGCCCTCTCATGGAAATGGAGGAAGGGGAAAAAGAAAGGCCGTGGCCGTGGAGGAACCCCTCGTCGATAAGGCCACTCTTCAGAAGCAGAGAAGGATGATCAAAAACAGAGAATCTGCCGCTAGGTCCAGAGAACGCAAGCAGGCTTACACAGTTGAGCTGGAGTCTTTGGTTACACATCTCGAGGAAGAGAACTGCCAGATTGTTAAAGGAAGAGGTATGTTTGTAATTGCGGACAGGAAAAGGCAGAGGTTCAATCAGCTCATGGAGTGCCTTATTCCAGTTGAGGAGAAGCGTAAACCAAAACGAATGCTTCGGAGAGTGAATTCATCCCAATGGTGA 495 0.4949 MASSKVAMTTTTTNSDISSQQQQQVWDESQDNNMSISLHDLLTSVSRNDAVLPSHGNGGRGKRKAVAVEEPLVDKATLQKQRRMIKNRESAARSRERKQAYTVELESLVTHLEEENCQIVKGRGMFVIADRKRQRFNQLMECLIPVEEKRKPKRMLRRVNSSQW 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01143 164 Gene3D - 78 123 - -
Pumo2g01143 164 CDD bZIP_plant_BZIP46 79 119 - -
Pumo2g01143 164 SUPERFAMILY Leucine zipper domain 79 121 IPR046347 GO:0003700|GO:0006355
Pumo2g01143 164 Pfam bZIP transcription factor 76 118 IPR004827 GO:0003700|GO:0006355
Pumo2g01143 164 SMART brlzneu 75 142 IPR004827 GO:0003700|GO:0006355
Pumo2g01143 164 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 82 97 IPR004827 GO:0003700|GO:0006355
Pumo2g01143 164 MobiDBLite consensus disorder prediction 1 28 - -
Pumo2g01143 164 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 78 127 - -
Pumo2g01143 164 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 77 119 IPR004827 GO:0003700|GO:0006355
Pumo2g01143 164 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 31 160 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01143 Pumo-Chr2 16663358 16665585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01143 52 164 bZIP Transcription Factor Family AT5G44080 58.261 8.62e-33 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo2g01143 bZIP_1 1.6e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01143 K14432 - gmx:100101878 203.756