Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01141 ATGAGTAGGGAGATAAAGTTTGAGGTGGAAGACAGAAAATGCATCAAACCCTCCAGCCCAACACCCCCACACCACAAAACCTTCAAACTCTCCCTACTGGACCAGCTTTCCCCTAATATCCATGGAAACATGACCCTCTTCTTCTACCCTCACACTCACACTCACACTCACACACTACTTGACTTCTCCACCAAATCCCAACTCCTTCAAACCTCCCTCTCCCAAACCTTGACCCGTTTCTACCCCCTCGCCGGACGCCTCCATGACGCCGCCACCGTTCACTGCAACGACGACGGTGCCATCTTCATCCAAGCCCGAACCAACGCCTCTCTCTCCGACATCCTCACAGCCCCAAACTTCGACACCCTCCAATGTCTCCTCCCCTCCGCCGACAACCAAACCTCAAACACTGCCATGCTCCTCGTCCGCTTCACCTCCTTCCGATGCGCCGGCACCGCCGTCACCATTTCTCTCTCCCACAAGATCGCCGACATAGCTGCCGTCATCTCACTCCTCAAAACCTGGACCGCTGCGTGCGCCGGAGCCACTACGCCTGAGGTCCCCGAACTCGCCCTCGGCGCCGCTCTCTTTCCTCCGAGAGAGATTCCCGGCATGTCCGCTTCCGTGAAAACCGTGTCATCGGAGAAGTTCACGTCGAGAAGGTTCGTTTTCGACGCGTCCAAGGTTAGAGAGCTTAAGGACAAAGTGAAAAGCGCACTGGAAATTCGTAAAGATGAAGGAGAAAGTTCGGTGTTTGAACCTTCGAGGGTGGAGGTGGTGCTGGCACTCATTTGGAAATGCGCCTTGTCTGCTTCTCGCTCGAAAACGGCATCATTTAAGCGTTCGGTTTTGTTCCAAGCCGTGAACCTCCGTCCCCGGATGGAGCCGGCGGTGCCGGACTCCGCCGTGGGGAACTTTGTGTGGGCGTTCGAGGTGGTGACGGCGGAGGAGGAGGGGCAGGTGGAGTTGCACGTGCTGGTGAGGAGGATGAGGGAGGGTATGAGGGAGTTTTTGGAGACAAAAGCAGAGAGGTTCAAAGAGGATGGTGCGTTTGGAGTGGTGATGGAGAGTCTGAAGGAGAGGGCTGAAGTAGTTTTGAGGAAGAGCAATGATACTGTTGTTTATAAGTGTTCGAGTTGGTGTAAGTTTCCACTGCTTAAGGTTGATTTTGGTTGGGGGGAGCCTGTGTGGATGTGCAGTGTGAATAAGGTTGTGAGTAATACCATTGCCTTGATGGATACCAAGGATGGTGGGGTTGAAGCTTTTGTCACTCTTGATGATCAACACATGGATTTTTTTCAACAAGATCAGGAGCTGCTACACTATGCTTTGCTTAATCCTAGTCTTATACTCTGA 1356 0.531 MSREIKFEVEDRKCIKPSSPTPPHHKTFKLSLLDQLSPNIHGNMTLFFYPHTHTHTHTLLDFSTKSQLLQTSLSQTLTRFYPLAGRLHDAATVHCNDDGAIFIQARTNASLSDILTAPNFDTLQCLLPSADNQTSNTAMLLVRFTSFRCAGTAVTISLSHKIADIAAVISLLKTWTAACAGATTPEVPELALGAALFPPREIPGMSASVKTVSSEKFTSRRFVFDASKVRELKDKVKSALEIRKDEGESSVFEPSRVEVVLALIWKCALSASRSKTASFKRSVLFQAVNLRPRMEPAVPDSAVGNFVWAFEVVTAEEEGQVELHVLVRRMREGMREFLETKAERFKEDGAFGVVMESLKERAEVVLRKSNDTVVYKCSSWCKFPLLKVDFGWGEPVWMCSVNKVVSNTIALMDTKDGGVEAFVTLDDQHMDFFQQDQELLHYALLNPSLIL 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01141 451 Gene3D - 4 204 IPR023213 -
Pumo2g01141 451 Pfam Transferase family 6 439 - -
Pumo2g01141 451 PANTHER F21J9.9 10 443 - -
Pumo2g01141 451 Gene3D - 214 443 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01141 Pumo-Chr2 16655231 16656729 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01141 5 435 Monolignol Biosynthesis Gene Families AT5G48930 21.552 4.07e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01141 - - gmx:100808502 696.812