Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01132 ATGAAGGATTTGTGCAATGTGGTGCAGGGGTTGAAACCTGTGCTTCTAATGGTAGTGGTGCAGATGGCATTTGCTGGGGTCAATGTGTTCTACAAGCTCGCCGTAAACGGTGGCATGAGCTTGACGGTCGTTGTTGCCTACCGTTTTGTATTCTCCACAGCTTTCATAGCTCCACTTGCTCTCATCGTTGAAAGGAAGAAGAGGACAAAGATGACTTGGACGGTACTGTTTCAGTCATTTCTTTGCGGCTTATTTGGGGGATCATTAGCTCAAAATTTCTACTTACAAGCCCTGGCTTTAACTTCTGCAACGTTTGCATCCGCAATGGCTAACCTTGTACCAGCCATAACCTTTATCTTGGCCGTTTCCTTCGGTTTGGAAAGATTAAATTTGAGAACAGCAGCAGGGAAGGCCAAAATAGCGGGTACATTAATTGGAATTGGTGGGGCAATGGTACTTACTTTCGTGAAAGGTGAGGATATCGAATTGGGGTCCTTTCACTTGAACCTTTTGCATCCCCGAAACGGTGCGCACGCGCACGCTAGTACCGGTGGTGCTAAGACCGTGTTTGGTTCTCTGTGCGCCTTGGCTAGTGGCATCAGCTATGCATTGTGGCTCATCGTTCAGGCCAAGATGAGTGAAAGATACCCTACTCCACTCTCAAGCACGGCGTTGATGTCACTTTGGGGTTCATTGTTGTCCGTTGTGTTTGCACTTTGCCTTGAGAGGGACTGGAGTCAGTGGAGGTTGGGTTGGAATATTAGGCTTTTGACTGCAGCATATTCGGGTATTGTGGTTTCTGGGATAATGGTGGTTGTGATTTCATGGATCGTCCGCATGAGAGGCCCATTGTTTGCCTCTGTTTTTAACCCCCTGATGCTCGTGATGGTGGCCGTTGCTGGTTCTACCATGTTGAACGAGAAGCTACACCTTGGATGCATTATTGGAGCAGCGATGATTGTGTGTGGCTTATATGTGGTTTTATGGGGTAAAAGTAAAGAGATGAAGAAGAAGAATCAATTAGTGCCAGCACAAAGCCCCCCTGACCATGAGTCTAATACGGTCGAAATAGTGGTGAGGTCTTCACTAGAAGATAAAAGCAACCGAAGCAAAACCCATGAAAATGCTGCAACAGTTGTTAGGGATAACGACGATTCAAGGGTAGATGGACACGAAGAGCATTGTTCACATGAACATAATCAGGGAAACATAGGAGAAGAAGATAATTCTAATAATGCTTCACATGCCTAA 1251 0.4612 MKDLCNVVQGLKPVLLMVVVQMAFAGVNVFYKLAVNGGMSLTVVVAYRFVFSTAFIAPLALIVERKKRTKMTWTVLFQSFLCGLFGGSLAQNFYLQALALTSATFASAMANLVPAITFILAVSFGLERLNLRTAAGKAKIAGTLIGIGGAMVLTFVKGEDIELGSFHLNLLHPRNGAHAHASTGGAKTVFGSLCALASGISYALWLIVQAKMSERYPTPLSSTALMSLWGSLLSVVFALCLERDWSQWRLGWNIRLLTAAYSGIVVSGIMVVVISWIVRMRGPLFASVFNPLMLVMVAVAGSTMLNEKLHLGCIIGAAMIVCGLYVVLWGKSKEMKKKNQLVPAQSPPDHESNTVEIVVRSSLEDKSNRSKTHENAATVVRDNDDSRVDGHEEHCSHEHNQGNIGEEDNSNNASHA 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01132 416 MobiDBLite consensus disorder prediction 363 404 - -
Pumo2g01132 416 SUPERFAMILY Multidrug resistance efflux transporter EmrE 228 333 - -
Pumo2g01132 416 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 154 - -
Pumo2g01132 416 PANTHER WAT1-RELATED PROTEIN 12 340 IPR030184 GO:0016020|GO:0022857
Pumo2g01132 416 MobiDBLite consensus disorder prediction 363 416 - -
Pumo2g01132 416 Pfam EamA-like transporter family 12 153 IPR000620 GO:0016020
Pumo2g01132 416 Pfam EamA-like transporter family 190 328 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01132 Pumo-Chr2 16566534 16570748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01132 11 382 Nodulin-like Gene Family AT1G25270 42.781 4.13e-94 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01132 - - gmx:100787839 646.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01132 2 16566534 16570748 Pumo2g01132 2 16566534 16570748 ECH