Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01108 ATGAGTCAGCGTGTGAGTGACGAGGTTGTGGCAAAGGCCATGGGGGAAATAAGAAGTGGGCCTTCTTTTTCACGTAGGGATGGAGATACTTTGCCACATATTCACAAGGTGGGAGCTCCTCCTAAGCAGACACTTTTCCAAGAGATCAAACATTCTGTGGTTGAGACTTTCTTCCCAGACAAACCCTTTGAACAATTTAAGGACCAAACTGGCTCTAGAAAGTTTCTTCTAGGCCTTCAATCTGTCTTCCCCATTTTTGGATGGGGAAGAGATTACAATCTTAAAAAATTCAGAGGTGATTTCATTTCTGGACTCACCATTGCAAGTCTATGTATCCCTCAGGACATTGCATACGCAAAGCTTGCAAATTTGGAGCCCCAATATGCACTCTACACCAGTTTTGTGTGTCCTCTTGTGTATGCTTTCATGGGAAGCTCAAGAGATATTGCCATAGGACCCGTAGCTGTGGTGTCCCTCTTGCTTGGGACTATGCTAACCGATGAGATCAGTGACTACAAAACTCATGAATACCTGCGTCTTGCATTTACTGCCACCTTCTTTGCAGGAGTCACTCAAATGGCACTTGGTGTTCTCAGGCTTGGTTTCTTGATTGACTTTTTGTCCCATGCTGCCATTGTGGGATTCATGGCTGGAGCTGCCATTACTATTGCACTGCAACAACTTAAAGGTTTTCTTGGCATAAAAACGTTCACCAAGAAAACTGATATTGTTTCTGTCCTGCGCTCGGTTTTCAATTCAGCACACCATGGGTGGAATTGGGAGACAATGGTCATTGGAGTAGCATTCTTGGTTTTCCTTCTTATAACCAAGTATATTGCTAAAAAGAATAAGAAACTCTTTTGGGTGGCTGCAATTTCTCCTATGATCTCTGTTATAGTGTCTACCTTTTTTGTCTACATAACCAGGGCAGACAAGAAAGGCGTGGCAATTGTGAAACATGTTAAGAAGGGTGTGAATCCATCATCTGCTAGTGAGATTTTTTTCAGTGGAAAATATCTAGGCCCTGGTATTCGGGTTGGTGTGGTAGCTGGTATGGTAGCACTCACGGAAGCTGTAGCAATTGGGAGAACATTTGCTGCCATGAAAGACTATTCACTGGATGGTAACAAAGAAATGGTGGCAATGGGAGCAATGAACATTATTGGTTCACTAACATCTTGTTATGTGGCTACAGGATCTTTTTCTCGCTCAGCAGTGAACTATATGGCTGGTTGTAAAACTGCTGTATCAAACATAGTTATGTCCATTGTTGTGTTATTAACACTGCTACTCATTACGCCACTCTTTAAGTACACTCCAAATGCGGTGCTTGCTTCTATTATAATAGCTGCCGTGCTTGGCCTTGTGAACATTGAAGCAGTTATTCTGCTGTGGAAGATTGACAAATTCGATTTTGTTGCTTGCATGGGAGCCTTCTTTGGTGTGATCTTCATAAGTGTTGAGATTGGCCTTCTGATTGCGGTGGCTATATCTTTTGCCAAAATCCTTTTACAAGTGACAAGACCAAGAACTGCAGTACTAGGGAAGCTTCCAGGGACTACTGTTTATAGGAACGTCCAGCAATACCCCAAAGCAACCCAAATTAATGGCATGCTGATTGTCAGGGTTGACTCTGCAATCTACTTCTCAAACTCCAACTATATCAAGGAGAGAATTTTGAGATGGCTGACTGATGAAGTAGCCCAAAGGACAACAAGTGGATTGTCCAGAATAGAGTATGTCACTGTTGAAATGTCACCTGTTACTGATATTGACACTAGTGGCATCCTTGCCTTTGAAGAGTTATATAAGAGCCTTCAGAAAAGAGAAATCCAGCTTATCTTGGCAAACCCAGGGCCAATTGTAATGGAGAAGCTCCACGCATCCAAGTTAACAAACTTAATTGGGGAAGATAAAATATTTCTAACAGTGGCTGATGCTGTTTCAACTTTTGGTCCAAAGGGTGATGCAGTGAAGAAAGAAACATGA 1989 0.4238 MSQRVSDEVVAKAMGEIRSGPSFSRRDGDTLPHIHKVGAPPKQTLFQEIKHSVVETFFPDKPFEQFKDQTGSRKFLLGLQSVFPIFGWGRDYNLKKFRGDFISGLTIASLCIPQDIAYAKLANLEPQYALYTSFVCPLVYAFMGSSRDIAIGPVAVVSLLLGTMLTDEISDYKTHEYLRLAFTATFFAGVTQMALGVLRLGFLIDFLSHAAIVGFMAGAAITIALQQLKGFLGIKTFTKKTDIVSVLRSVFNSAHHGWNWETMVIGVAFLVFLLITKYIAKKNKKLFWVAAISPMISVIVSTFFVYITRADKKGVAIVKHVKKGVNPSSASEIFFSGKYLGPGIRVGVVAGMVALTEAVAIGRTFAAMKDYSLDGNKEMVAMGAMNIIGSLTSCYVATGSFSRSAVNYMAGCKTAVSNIVMSIVVLLTLLLITPLFKYTPNAVLASIIIAAVLGLVNIEAVILLWKIDKFDFVACMGAFFGVIFISVEIGLLIAVAISFAKILLQVTRPRTAVLGKLPGTTVYRNVQQYPKATQINGMLIVRVDSAIYFSNSNYIKERILRWLTDEVAQRTTSGLSRIEYVTVEMSPVTDIDTSGILAFEELYKSLQKREIQLILANPGPIVMEKLHASKLTNLIGEDKIFLTVADAVSTFGPKGDAVKKET 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01108 662 SUPERFAMILY SpoIIaa-like 530 652 IPR036513 -
Pumo2g01108 662 Pfam Sulfate permease family 97 476 IPR011547 GO:0016020
Pumo2g01108 662 Pfam STAS domain 529 647 IPR002645 -
Pumo2g01108 662 CDD STAS_SulP_like_sulfate_transporter 529 644 - -
Pumo2g01108 662 Gene3D STAS domain 508 652 IPR036513 -
Pumo2g01108 662 NCBIfam sulfate permease 84 647 IPR001902 GO:0016020|GO:0055085
Pumo2g01108 662 FunFam Sulfate transporter 31 508 654 - -
Pumo2g01108 662 ProSiteProfiles STAS domain profile. 528 651 IPR002645 -
Pumo2g01108 662 PANTHER SULFATE TRANSPORTER 44 650 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01108 Pumo-Chr2 16184795 16188806 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01108 15 654 Inorganic Solute Cotransporters AT1G22150 72.543 0.0 926
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01108 K17470 - gmx:100784124 1193.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01108 2 16184795 16188806 Pumo2g01108 2 16184795 16188806 ECH