Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01107 ATGGACGTTCTAACCTTAAGCTCAAGTCTTAGCAATTCCAAACCATTTGATTTCCTTCCACTCTCAAAGAAACACCAAAGAGTAAGACCTCCTCGTACGACGCCGTCTGTTGTTTCATGCAGAGCCACAAAACAGGTTCGAGGTGTGGACGACAACTTGTACAAGGTACTAAGTTTGAGTCCCAAAAGTGCAACCACGGATGACATAAAGAAAGCATACAGATCAATGGCTCTTCGGTACCATCCTGATTTGTGCCATGACGGTTCCAAGAAAGAGGAATCAACGAGGATGTTTGTGCAACTCAACGCAGCTTACAAGACCTTGTCGAATCCGAGGCTTCGAGCAGAGTATGACTATGAATTGGGTTTGAGAAGTGAAAAGAGTGTTGGTGATGAGAGTTGGAGATTTATATGGCAGGAGCAAGTGGCTGAGTTGAAGAAAAGGTCTCACAGACGTATGGCACAAAAGGAGGGATCGTGGGGCAGTAGAATCAGAGCGCAAAACATTATTTAA 513 0.4464 MDVLTLSSSLSNSKPFDFLPLSKKHQRVRPPRTTPSVVSCRATKQVRGVDDNLYKVLSLSPKSATTDDIKKAYRSMALRYHPDLCHDGSKKEESTRMFVQLNAAYKTLSNPRLRAEYDYELGLRSEKSVGDESWRFIWQEQVAELKKRSHRRMAQKEGSWGSRIRAQNII 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01107 170 PRINTS DnaJ domain signature 55 73 IPR001623 -
Pumo2g01107 170 PRINTS DnaJ domain signature 73 88 IPR001623 -
Pumo2g01107 170 PRINTS DnaJ domain signature 93 113 IPR001623 -
Pumo2g01107 170 Gene3D DnaJ domain 39 155 IPR036869 -
Pumo2g01107 170 SUPERFAMILY Chaperone J-domain 28 117 IPR036869 -
Pumo2g01107 170 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 22 168 - -
Pumo2g01107 170 CDD DnaJ 52 110 IPR001623 -
Pumo2g01107 170 SMART dnaj_3 51 113 IPR001623 -
Pumo2g01107 170 Pfam DnaJ domain 52 118 IPR001623 -
Pumo2g01107 170 ProSiteProfiles dnaJ domain profile. 52 121 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01107 Pumo-Chr2 16175833 16176345 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01107 54 118 C2H2 Transcription Factor Family AT1G74250 41.791 8.49e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01107 - - gmx:100783590 256.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01107 2 16175833 16176345 Pumo2g01107 2 16175833 16176345 ECH
Pumo6g01593 6 23307916 23308739 Pumo2g01107 2 16175833 16176345 PCT