Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01106 ATGGGTGTTCAAACCTTCAGCTCAAGCCTTAGTATTCATTTCTTCCCACCCTCAAAGAAACACCAAAGAGTAAGACCTCCTCGTACGACGCCGTCTGTTGTTTCATGCAGAGCCACAAAACAGGTTCGAGGTGTGGACGACAACCTGTACAAGGTACTAAGTTTGAGTCCCAAAAGTGCAACCACGGATGACATAAAGAAAGCATACAGATCAATGGCTCTTCGGTACCATCCTGATTTGTGCCATGACGGTTCCAAGAAAGAGGAATCAACGAGGATGTTTGTGCAACTCAACGCAGCTTACAAGACCTTGTCGAATCCGAGGCTTCGAGCAGAGTATGACTATGAATTGGGTTTGAGAAGTGAAAAGAGTGTTGGTGATGAGAGTTGGAGATTTATATGGCAGGAGCAAGTGGCTGAGTTGAAGAAAAGGTCTCACAGACGTATGGCACAAAAGGAGGGATCGTGGGGCAGTAGAGTCAGAGCGCAAAACATTATTTAA 501 0.4571 MGVQTFSSSLSIHFFPPSKKHQRVRPPRTTPSVVSCRATKQVRGVDDNLYKVLSLSPKSATTDDIKKAYRSMALRYHPDLCHDGSKKEESTRMFVQLNAAYKTLSNPRLRAEYDYELGLRSEKSVGDESWRFIWQEQVAELKKRSHRRMAQKEGSWGSRVRAQNII 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01106 166 ProSiteProfiles dnaJ domain profile. 48 117 IPR001623 -
Pumo2g01106 166 SMART dnaj_3 47 109 IPR001623 -
Pumo2g01106 166 Pfam DnaJ domain 48 114 IPR001623 -
Pumo2g01106 166 CDD DnaJ 48 106 IPR001623 -
Pumo2g01106 166 Gene3D DnaJ domain 35 151 IPR036869 -
Pumo2g01106 166 SUPERFAMILY Chaperone J-domain 22 113 IPR036869 -
Pumo2g01106 166 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 26 164 - -
Pumo2g01106 166 PRINTS DnaJ domain signature 51 69 IPR001623 -
Pumo2g01106 166 PRINTS DnaJ domain signature 69 84 IPR001623 -
Pumo2g01106 166 PRINTS DnaJ domain signature 89 109 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01106 Pumo-Chr2 16135106 16135606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01106 50 114 C2H2 Transcription Factor Family AT1G74250 41.791 8.62e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01106 - - gmx:100783590 236.884