Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01102 ATGGCAGCTGCAACTTCTGGTGCTGTGTTAAATGGGTTGGGATCTTCCTTCTTGAGTGGAGGAAACAGGAGCCAAACCCTTCTGGCCACTGCTATTGGAGGCAAACTTGGTGCTGCTGTTAGTCCTAGAAGACTCGTTGTGGTAGCTGCTGCTGCACCAAAGAAGTCGTGGCTCCCTGGTGTCAGAGGTGGTGGCAATCTCGTCGACCCAGAATGGCTTGATGGATCGCTACCAGGTGACTATGGTTTTGACCCACTAGGTCTTGGCAAGGACCCAGCATTCCTCAAATGGTACAGAGAAGCTGAGCTCATTCATGGGAGATGGGCAATGGCTGCAGTTGTAGGAATCTTTGTGGGGCAGGCATGGAGTGGAGTGCCATGGTTTGAGGCTGGAGCTGACCCCAATGCAATTGCTCCTTTCTCCTTTGGTTCTCTTTTGGGAACCCAGTTGCTTCTCATGGGGTGGGTTGAGAGCAAGAGATGGGTGGACTTCTTCGACCCAGACTCGCAGTCAGTGGAATGGGCAACTCCATGGTCAAGAACAGCTGAGAACTTTGCCAATGCCACTGGTGATCAAGGCTACCCAGGAGGCAAATTCTTTGACCCTTTGAGCTTTGCTGGAACTATCAAGGATGGAGTTTACATTCCGGATGCAGAGAAGCTGGAAAGATTGAAATTGGCTGAGATTAAGCATGCCAGGATTGCTATGTTGGCCATGTTGATTTTCTACTTTGAGGCTGGACAAGGGAAGACCCCCCTTGGTGCTCTTGGCTTGTAA 777 0.5084 MAAATSGAVLNGLGSSFLSGGNRSQTLLATAIGGKLGAAVSPRRLVVVAAAAPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGVPWFEAGADPNAIAPFSFGSLLGTQLLLMGWVESKRWVDFFDPDSQSVEWATPWSRTAENFANATGDQGYPGGKFFDPLSFAGTIKDGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01102 258 Pfam Chlorophyll A-B binding protein 70 246 IPR022796 -
Pumo2g01102 258 FunFam Chlorophyll a-b binding protein, chloroplastic 70 257 - -
Pumo2g01102 258 Gene3D Chlorophyll a/b binding protein domain 70 257 - -
Pumo2g01102 258 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 54 256 IPR001344 GO:0009765|GO:0016020
Pumo2g01102 258 SUPERFAMILY Chlorophyll a-b binding protein 67 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01102 Pumo-Chr2 16077225 16078953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01102 1 258 Chloroplast and Mitochondria Gene Families AT1G15820 81.538 5.49e-152 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01102 K08917 - gmx:100527463 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01102 2 16077225 16078953 Pumo2g01102 2 16077225 16078953 ECH
Pumo6g01595 6 23332072 23333325 Pumo2g01102 2 16077225 16078953 PCT