Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01097 ATGGGTATTTCATTTATTATCAATGTGGTTCTTCTGCTTGCAATTATATTGATATTGATGCTTTACTATAACACAACCAGAAAGCTTAATAAAATAGTGAAGGGGCAGATTCCCACAGTCATAGAAAAAGAGAGTGATGTGGAGATCAGTGTTGACAAGAAGATAGAGATAGGGGAGGGGACAAGGATGGTGACAGTGGAAGAGAGAAAGGAACTCATGTTCTTTGATGATAAGGCTAAATTTCAAATGGGTGAACTTCTTAGAGCTTCTGCTGAGGCACTGGGTCACGGGATCTTGGGAAATAGTTATAAGGCTATGCTGAATGATGGACCTACCATTGTTGTAAAGAGGCTGAGGGACTTAAAGCCACTCTCTAAGGAGGAATTTGCAAATATATTAAATGTGATTGCTGATATGAAGCACCCCAATTTGTTGCCTTTGCTGGCTTACTACCATTCCAGAGATGAGAAGCTCATGCTCTACACATATGCACAGAACGGAAATCTTTTCTCCCGGCTTCATGATGGTAGAGGTGGAAATCGAGTTCCATTCAGTTGGAACTCAAGATTGTCAGTTGCAATAGGAGTGGCTCGAGCATTGGTGTACCTGCACCTCGGCCGCAAGTTCCACAACGTTGTCCCACATGGCAACTTGCGGTCTTCGAACGTGCTATTCGATGAAAACGATGCAGTTCTTGTTTCTGACTTTGGTCTTGGCTCCTTGATAGCACAACCAATTGCAGCTCAGCACATGGTTGTTTACAAATCACCTGAATATGGGTATGCAAGAAGGGTGACAATGCAATCCGATGTTTGGAGCTATGGATCACTTCTGATAGAGCTTCTAACTGGGAAAGTGTCTGTTTGCTCAGCTCCACCAGGGACCAATGGGGTGGATCTATGCAGTTGGGTTCACAGAGCTGTGAGGGAAGAATGGACTGCTGAGATATTTGACAAAGAAATTTCTGGCCAAAAGAGTGCACTTCCTGGGATGTTGAGGTTGCTGCAGATTGCAATGCGTTGCATTGAGAGGTTCCCAGAGAAACGTCCTGAGATGAAAGAGGTGATGAGAGAAGTGGAGAAAATACAGGCTCCCTTGATCTTTGAAGATGATGATGATGTATCTGGGGATAGGTCCCTAACTGATGATTCCCTTTCAACCAATACTTCCATAATGGGAGATGAAAGATAG 1191 0.4366 MGISFIINVVLLLAIILILMLYYNTTRKLNKIVKGQIPTVIEKESDVEISVDKKIEIGEGTRMVTVEERKELMFFDDKAKFQMGELLRASAEALGHGILGNSYKAMLNDGPTIVVKRLRDLKPLSKEEFANILNVIADMKHPNLLPLLAYYHSRDEKLMLYTYAQNGNLFSRLHDGRGGNRVPFSWNSRLSVAIGVARALVYLHLGRKFHNVVPHGNLRSSNVLFDENDAVLVSDFGLGSLIAQPIAAQHMVVYKSPEYGYARRVTMQSDVWSYGSLLIELLTGKVSVCSAPPGTNGVDLCSWVHRAVREEWTAEIFDKEISGQKSALPGMLRLLQIAMRCIERFPEKRPEMKEVMREVEKIQAPLIFEDDDDVSGDRSLTDDSLSTNTSIMGDER 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01097 396 SUPERFAMILY Protein kinase-like (PK-like) 92 364 IPR011009 -
Pumo2g01097 396 Pfam Protein tyrosine and serine/threonine kinase 92 358 IPR001245 GO:0004672|GO:0006468
Pumo2g01097 396 SMART serkin_6 88 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g01097 396 MobiDBLite consensus disorder prediction 380 396 - -
Pumo2g01097 396 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 6 363 IPR046959 -
Pumo2g01097 396 ProSiteProfiles Protein kinase domain profile. 88 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g01097 396 Gene3D Phosphorylase Kinase; domain 1 55 163 - -
Pumo2g01097 396 MobiDBLite consensus disorder prediction 370 396 - -
Pumo2g01097 396 Gene3D Transferase(Phosphotransferase) domain 1 164 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01097 Pumo-Chr2 16038025 16039984 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01097 53 387 Receptor kinase-like Gene Family AT2G36570 39.888 1.26e-77 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pumo2g01097 PK_Tyr_Ser-Thr 4.8e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01097 - - gmx:100816006 691.419