Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01091 ATGCCTTTGTCTCTTTCAATTCCGATTCCAATTCCGATTCCAATCGCAATGGATTCTACGTCGGCCGTGACGGTGACGCAGATGGCGCTTTTCAAACCTCTGAAGCAGAAGCACCACCGTCATTTGGTCAGAGGCAGAGTCAGTGTTAGACCACTTCATCGCCGCCTCAACTCCGTTACGCCTTTGCGGTGCTCTTCCGCCGTCATTACTCTCCACGTCGGGGGAATGATGTGCGAGGGATGTGCAAATAGCGTCAAAAAAATTCTAGAAAGCCGACCACAAGTGTTATCTGCTCATGTAAATTTGACATCCGAGACAGCAGTTGTTTCCCCTGTACCTGAAGAGAAAACTGCACCAAATCACCTCAAGCAATTAGGGGAGGAACTTGCACAGCATCTAACTACCTCTGGTTTTGCTTCTACTCTTCAAGGTATGGGTTCAAGCTTCTCAACATATTGTTTCAATTGGTTTTCATTATGGTGTTCGATGTTGCAAATGTCACTATATTTGTTTTTATGA 519 0.4566 MPLSLSIPIPIPIPIAMDSTSAVTVTQMALFKPLKQKHHRHLVRGRVSVRPLHRRLNSVTPLRCSSAVITLHVGGMMCEGCANSVKKILESRPQVLSAHVNLTSETAVVSPVPEEKTAPNHLKQLGEELAQHLTTSGFASTLQGMGSSFSTYCFNWFSLWCSMLQMSLYLFL 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01091 172 ProSiteProfiles Heavy-metal-associated domain profile. 67 134 IPR006121 GO:0046872
Pumo2g01091 172 Pfam Heavy-metal-associated domain 70 120 IPR006121 GO:0046872
Pumo2g01091 172 ProSitePatterns Heavy-metal-associated domain. 73 102 IPR017969 GO:0046872
Pumo2g01091 172 SUPERFAMILY HMA, heavy metal-associated domain 67 126 IPR036163 GO:0046872
Pumo2g01091 172 FunFam Copper-transporting ATPase PAA1, chloroplastic 67 142 - -
Pumo2g01091 172 Gene3D - 65 145 - -
Pumo2g01091 172 CDD HMA 70 126 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01091 Pumo-Chr2 15985701 15987955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01091 65 141 Primary Pumps ATPases AT4G33520 66.234 1.59e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01091 - K17686 gmx:100527143 216.853