Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01089 ATGGATTGTTTCTGTTGCTTCAACAATCGGGCGGTTGGAGGACGCACTTCATGTAGCTCTGGCAAGGGCAAGAGCCATCAGTGCTCAGTTAAATATGGCTTTAGCCTAGTTAAAGGGAAAGCAAACCACCCAATGGAGGACTACCATGTAGCAAAAATGGTCAAGTTAGGAGGGCAAGAGTTAGGACTTTTTGCTATATATGATGGACACTTGGGAGACAGCGTGCCTGCCTATTTACAAAAGCATCTCTTTTCTAATATCTTGAAGGAGGAGGACTTCTGGACTGATCCAGCCAGTTCCATCATTAAAGCCTATGAGACAACAGATCAGGCCATTCTTTCTCACAGTTCTGATTTGGGGCGAGGAGGATCGACTGCAGTGACTGCAATTCTTATTAATAATCAGAAGTTATGGGTAGCAAATGTTGGAGATTCACGAGCAGTTTTGTCAAGGAGAGGGGTGGCCTGA 468 0.4509 MDCFCCFNNRAVGGRTSCSSGKGKSHQCSVKYGFSLVKGKANHPMEDYHVAKMVKLGGQELGLFAIYDGHLGDSVPAYLQKHLFSNILKEEDFWTDPASSIIKAYETTDQAILSHSSDLGRGGSTAVTAILINNQKLWVANVGDSRAVLSRRGVA 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01089 155 Pfam Protein phosphatase 2C 40 153 IPR001932 -
Pumo2g01089 155 SUPERFAMILY PP2C-like 25 154 IPR036457 -
Pumo2g01089 155 Gene3D - 9 155 IPR036457 -
Pumo2g01089 155 SMART PP2C_4 27 155 IPR001932 -
Pumo2g01089 155 ProSiteProfiles PPM-type phosphatase domain profile. 31 155 IPR001932 -
Pumo2g01089 155 PANTHER PROTEIN PHOSPHATASE 26 151 IPR015655 GO:0004722|GO:0006470
Pumo2g01089 155 CDD PP2Cc 30 155 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01089 Pumo-Chr2 15948726 15950787 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01089 1 155 PP2C-type Phosphatase Gene Family AT1G34750 72.785 1.44e-78 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01089 K17506 - gmx:100787659 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01618 6 23583438 23592227 Pumo2g01089 2 15948726 15950787 PCT