Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01088 ATGACTGTTGATCATGAGCCCAATACTGAGAGGGGCATCATCGAGAACAAAGGCGGCTTTGTCTCAAACATGCCAGGAGACGTTGCAAGAGTAAATGGGCAGCTTGCAGTTTCTCGAGCATTTGGAGACAAAAATCTAAAATCACACTTACGATCTGATCCTGATGTGCGACATGTTGATATTGACCCAGATGCTGAGCTTTTGATACTTGCTAGTGATGGTCTTTGGAAGGTAATGGCAAACCAAGAGGCAGTTGATATTGCAAGAAGGACAAAAGATCCACAAAAGGCAGCAAAACAACTAGTTGCCGAGTCATTGAACAGAGATAGTAAGGATGATATTTCGTGCATTGTAGTTCGTTTCAAGGGATGA 372 0.4301 MTVDHEPNTERGIIENKGGFVSNMPGDVARVNGQLAVSRAFGDKNLKSHLRSDPDVRHVDIDPDAELLILASDGLWKVMANQEAVDIARRTKDPQKAAKQLVAESLNRDSKDDISCIVVRFKG 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01088 123 CDD PP2Cc 1 121 IPR001932 -
Pumo2g01088 123 Pfam Protein phosphatase 2C 1 114 IPR001932 -
Pumo2g01088 123 SMART PP2C_4 1 119 IPR001932 -
Pumo2g01088 123 ProSiteProfiles PPM-type phosphatase domain profile. 1 121 IPR001932 -
Pumo2g01088 123 PANTHER PROTEIN PHOSPHATASE 2 121 IPR015655 GO:0004722|GO:0006470
Pumo2g01088 123 SUPERFAMILY PP2C-like 1 122 IPR036457 -
Pumo2g01088 123 Gene3D - 1 123 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01088 Pumo-Chr2 15946823 15948721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01088 1 122 PP2C-type Phosphatase Gene Family AT1G22280 68.852 1.69e-61 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01088 K17506 - gmx:100787659 242.276