Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01054 ATGAATAAGAAGCAAGATGTGTTTTGGGTTACACAGAGGAGGAGTAGGCCAACGACTTTCATGCTTTTCACAGTACTTGAATATACGGATGGTAAATGGGTTTGTTCAGGTCCCACTTGTGGCTTAGGTGAAGAGACTGCTAGGAGATACTTGCGTGATATAGTTTCTGGATTAACATATCTCCATGCTCATAATATAGTGCATGGGGATATTAAACCAGATAACCTATTGATTACTCGTCATGGTACAGTAAAGATAGGGGATTTCATTGTCAGCCAGGCTTTTGAGGTAGTGTTTCTTCAACTGCAACATGGAAAACTTTTCTCTTTAGGAAAAATGTAA 342 0.3918 MNKKQDVFWVTQRRSRPTTFMLFTVLEYTDGKWVCSGPTCGLGEETARRYLRDIVSGLTYLHAHNIVHGDIKPDNLLITRHGTVKIGDFIVSQAFEVVFLQLQHGKLFSLGKM 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01054 113 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 19 104 - -
Pumo2g01054 113 Pfam Protein kinase domain 24 94 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g01054 113 ProSiteProfiles Protein kinase domain profile. 1 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g01054 113 SUPERFAMILY Protein kinase-like (PK-like) 21 89 IPR011009 -
Pumo2g01054 113 ProSitePatterns Serine/Threonine protein kinases active-site signature. 66 78 IPR008271 GO:0004672|GO:0006468
Pumo2g01054 113 Gene3D Transferase(Phosphotransferase) domain 1 7 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01054 Pumo-Chr2 15598322 15600146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01054 22 93 AGC Kinase Gene Family AT5G62310 44.000 8.53e-13 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Pumo2g01054 Pkinase 2.7e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01054 K00908 K07359 gmx:100789178 139.043