Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01052 ATGGTTAAGGATCATAGGTCTTGGCCTTACCCACAGCACGTGGCTTGGCCACCACCTTACTTAAATTGCTCCTGCACCTTGGCGGAGCCTAGCTCACGGGTTCATTCAGCATATATGAACCCTAGCACATGCATCTTTCCTGCTGTCAGCGTATTTCCAGGATTCACAGCTCCTGCTATCCCAAACTTGAAGACCGAGCAGACCAATGAAGTGCAAGGATTCCTTCAGTATCCCAATTCAGAACCATGTCTGAAAGAAACACATACTGGAGGGGCTATGCAAAATGCAAATCATGGATCTTTGCAGAAGAAGTTACTTATTTTTGACCACTCTGGTAGTAAGACAAGGTTGCTTTATAGTCCTCTCTTCCCTCTTGTCCAGAGTCCAATTGTTACTGCTACACAATTTGCTCAAGTTTATGATTTAAATGAGGAAGCACCGGCAACTACTATGGGCCTAAAGCATTTACCCATATACACTTCACCAGAAGAGTCTGGTAAGGATCATATAGACAATGAAAAAAGTGAAATGCATGAAGACACAGAAGAAATCAATGCATTGCTTGATTCTGATGATTCTGACGATGATGATGAGGTAACAAGTACAGGTCATTCTCCATTGGTTAGTAAAAGAACTTATGTGATGCAAGAACAGTTTGCAGACATGAAGGAGGAGGTTGCTAGCTCTGATTGGCCAAACAAAAGGCAGAAGTTAATTGATGGTGGATACAATAGATTACCACCACTTGTGGACAGTGCTAGTTCTGAAAGGCTACATGAAATGTGCGAGTTTGCCAGCGATGCTGAATCGAAGTATTCTAGTAGTGGCGGGGTGTATGCTGCAAGGCAAACTAAAGAAGATAATTCAACACCTGCTGATATTCAATTGAAAAAGGATAAAATCCGTGAATTGTTGAGAGTTCTTGAGAACTTTATTCCTGGAGCAAAAGGAAAGCATCCCCTGTTAGTCATTGATGGTACTATTGAGTACTTGAAATCTTTTACGTCCCAAGCTGGTACACTGAAATATCACTAA 1035 0.4184 MVKDHRSWPYPQHVAWPPPYLNCSCTLAEPSSRVHSAYMNPSTCIFPAVSVFPGFTAPAIPNLKTEQTNEVQGFLQYPNSEPCLKETHTGGAMQNANHGSLQKKLLIFDHSGSKTRLLYSPLFPLVQSPIVTATQFAQVYDLNEEAPATTMGLKHLPIYTSPEESGKDHIDNEKSEMHEDTEEINALLDSDDSDDDDEVTSTGHSPLVSKRTYVMQEQFADMKEEVASSDWPNKRQKLIDGGYNRLPPLVDSASSERLHEMCEFASDAESKYSSSGGVYAARQTKEDNSTPADIQLKKDKIRELLRVLENFIPGAKGKHPLLVIDGTIEYLKSFTSQAGTLKYH 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01052 344 PANTHER TRANSCRIPTION FACTOR BHLH145 8 342 IPR037546 -
Pumo2g01052 344 Coils Coil 170 190 - -
Pumo2g01052 344 MobiDBLite consensus disorder prediction 158 208 - -
Pumo2g01052 344 MobiDBLite consensus disorder prediction 161 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01052 Pumo-Chr2 15576319 15577353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01052 91 332 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G64340 40.392 6.18e-25 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01052 - - gmx:100778385 614.764