Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01050 ATGGGAGTGGAGAAGCAGTTGTTGAGGCCTGGCACTGGTCCCAAGCCAATTCCCGGTCAAAACGTCACCGTTCACTGCACTGGTTTCGGGAAGAACGGTGACCTTTCTCAGAAATTTTGGAGCACAAAGGATCCTGGCCAGAACCCTTTCACATTCAAAATTGGCCAAGGTTCTGTTATCAAAGGATGGGATGAAGGTGTGCTTGGCATGCAAGTTGGTGAAGTTGCTCGTCTCCGGGTAATATTTCTATTACAATTAACAATTCTCTGCTCTTACATCTTGTTTCCACTTGAAAACCATTACATACATTATGTGAATTGTCGACACTCGACGTTATCTCCTATAAATCTGAGCTTTCTCTCATTACAAAACTTGTAG 378 0.4365 MGVEKQLLRPGTGPKPIPGQNVTVHCTGFGKNGDLSQKFWSTKDPGQNPFTFKIGQGSVIKGWDEGVLGMQVGEVARLRVIFLLQLTILCSYILFPLENHYIHYVNCRHSTLSPINLSFLSLQNL 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01050 125 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 2 79 - -
Pumo2g01050 125 SUPERFAMILY FKBP-like 2 80 - -
Pumo2g01050 125 Gene3D - 1 88 IPR046357 GO:0003755
Pumo2g01050 125 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 15 80 IPR001179 GO:0003755
Pumo2g01050 125 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 19 80 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01050 Pumo-Chr2 15564264 15565975 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01050 2 76 Calmodulin-binding Proteins AT3G25230 46.053 2.26e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01050 K01802 - gmx:100500283 167.162